RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 DCAF4L1Q3SXM0 396 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 MBLAC2Q68D91 279 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 ZNF567Q8N184 647 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 CDYL2Q8N8U2 506 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 OR2T34Q8NGX1 318 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 OR2T3Q8NH03 318 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 UBASH3BQ8TF42 649 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 VPS33AQ96AX1 596 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 ENTPD7Q9NQZ7 604 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 RASSF1Q9NS23 344 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 DHX15O43143 795 aaKnown RBP13.61□□□□□ -0.23
USP42-206ENST00000479544 SOAT2O75908 522 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 B3GAT3O94766 335 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 CDH2P19022 906 aaPredicted RBP13.61□□□□□ -0.23
USP42-206ENST00000479544 YWHAQP27348 245 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 SQLEQ14534 574 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 KCNJ11Q14654 390 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 PCLAFQ15004 111 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 ARMC4Q5T2S8 1044 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 FOXB2Q5VYV0 432 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 COQ7Q99807 217 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 MRIQ9BWK5 157 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 C20orf27Q9GZN8 174 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 MRGBPQ9NV56 204 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 SETD4Q9NVD3 440 aa13.61□□□□□ -0.23
USP42-206ENST00000479544 COPG1Q9Y678 874 aaKnown RBP13.61□□□□□ -0.23
USP42-206ENST00000479544 MAGEB16A2A368 324 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 TMEM114B3SHH9 223 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 PLA2G6O60733 806 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 CNOT3O75175 753 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 LYPLA2O95372 231 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 FGF3P11487 239 aaPredicted RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 IDH2P48735 452 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 HK2P52789 917 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 CEACAM7Q14002 265 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 DGUOKQ16854 277 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 MRNIPQ6NTE8 343 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 ZBTB8BQ8NAP8 495 aaPredicted RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 FAM120BQ96EK7 910 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 KCTD15Q96SI1 283 aaPredicted RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 FBRSL1Q9HCM7 1045 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 TMEM161AQ9NX61 479 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP42-206ENST00000479544 C2CD4BA6NLJ0 364 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 LBPP18428 481 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 SLC25A11Q02978 314 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 ESRP1Q6NXG1 681 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 PRR23BQ6ZRT6 265 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 TERB1Q8NA31 727 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 RBBP8Q99708 897 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 ST6GALNAC4Q9H4F1 302 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 ZFP14Q9HCL3 533 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 COMMD8Q9NX08 183 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 CACNA2D2Q9NY47 1150 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 PSMD3O43242 534 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 ATG7O95352 703 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 ALDOAP04075 364 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 GJA8P48165 433 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 LIMK2P53671 638 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 TAS2R39P59534 338 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 ANKS6Q68DC2 871 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 PTRHD1Q6GMV3 140 aaKnown RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 METTL7BQ6UX53 244 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 GCNT7Q6ZNI0 430 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 GATAD2AQ86YP4 633 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
USP42-206ENST00000479544 OMA1Q96E52 524 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 PLEKHA8Q96JA3 519 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 SIGLEC10Q96LC7 697 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 KATNAL1Q9BW62 490 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 UNC93B1Q9H1C4 597 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 EBF1Q9UH73 591 aa13.6□□□□□ -0.23
USP42-206ENST00000479544 BTN3A1O00481 513 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 FFAR3O14843 346 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 KLF11O14901 512 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 GPR42O15529 346 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 CYP2C9P11712 490 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 DNASE1L3Q13609 305 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 TBC1D25Q3MII6 688 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 REP15Q6BDI9 236 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 IQSEC1Q6DN90 963 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 PNPLA1Q8N8W4 532 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 MTERF3Q96E29 417 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 RPRD1AQ96P16 312 aaPredicted RBP13.59□□□□□ -0.23
USP42-206ENST00000479544 FETUBQ9UGM5 382 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 BCLAF3A2AJT9 711 aaKnown RBP13.59□□□□□ -0.23
USP42-206ENST00000479544 EVPLLA8MZ36 301 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 IMPDH2P12268 514 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 FMO4P31512 558 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 ATP6V1E1P36543 226 aa13.59□□□□□ -0.23
USP42-206ENST00000479544 PIK3CGP48736 1102 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms