RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 ZNF542PQ5EBM4 170 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 KDM7AQ6ZMT4 941 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 SRLQ86TD4 932 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 CAMK1DQ8IU85 385 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 DENND6BQ8NEG7 585 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 CXorf40AQ8TE69 158 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 TEKT4Q8WW24 435 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 ZNF641Q96N77 438 aaPredicted RBP17.98■□□□□ 0.47
HLA-A-206ENST00000479320 WRAP53Q9BUR4 548 aaKnown RBP17.98■□□□□ 0.47
HLA-A-206ENST00000479320 TSPY26PQ9H489 355 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.98■□□□□ 0.47
HLA-A-206ENST00000479320 ETNK2Q9NVF9 386 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 IPO11Q9UI26 975 aaKnown RBP17.98■□□□□ 0.47
HLA-A-206ENST00000479320 NENFQ9UMX5 172 aa17.98■□□□□ 0.47
HLA-A-206ENST00000479320 KNTC1P50748 2209 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 SIGLEC6O43699 453 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 RFPL3O75679 317 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 PIAS2O75928 621 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 GIMD1P0DJR0 217 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 CKMT2P17540 419 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 XPAP23025 273 aaPredicted RBP17.97■□□□□ 0.47
HLA-A-206ENST00000479320 EIF4A3P38919 411 aaKnown RBP17.97■□□□□ 0.47
HLA-A-206ENST00000479320 PFN3P60673 137 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 SLC25A11Q02978 314 aaKnown RBP17.97■□□□□ 0.47
HLA-A-206ENST00000479320 NSUN2Q08J23 767 aaKnown RBP eCLIP17.97■□□□□ 0.47
HLA-A-206ENST00000479320 ELP6Q0PNE2 266 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 RFTN1Q14699 578 aaPredicted RBP17.97■□□□□ 0.47
HLA-A-206ENST00000479320 UGP2Q16851 508 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 PROX2Q3B8N5 592 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 TPRG1LQ5T0D9 272 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 CSPG4P5Q96PW8 444 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 TUBGCP5Q96RT8 1024 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 CINPQ9BW66 212 aaPredicted RBP17.97■□□□□ 0.47
HLA-A-206ENST00000479320 PCDH18Q9HCL0 1135 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 SPTLC3Q9NUV7 552 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 DNAJC28Q9NX36 388 aa17.97■□□□□ 0.47
HLA-A-206ENST00000479320 ZZEF1O43149 2961 aa17.96■□□□□ 0.47
HLA-A-206ENST00000479320 DMXL2Q8TDJ6 3036 aa17.96■□□□□ 0.47
HLA-A-206ENST00000479320 FAM149AA5PLN7 773 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 MYO1FO00160 1098 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 MUSKO15146 869 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 CBFA2T2O43439 604 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 CDK4P11802 303 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 HNRNPKP61978 463 aaKnown RBP eCLIP17.96■□□□□ 0.46
HLA-A-206ENST00000479320 ZNF211Q13398 564 aaPredicted RBP17.96■□□□□ 0.46
HLA-A-206ENST00000479320 PDE1CQ14123 709 aaPredicted RBP17.96■□□□□ 0.46
HLA-A-206ENST00000479320 SPECC1LQ69YQ0 1117 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 TMCO3Q6UWJ1 677 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 ZSWIM9Q86XI8 627 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 OR8K1Q8NGG5 319 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 OR4C6Q8NH72 309 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 ATP13A3Q9H7F0 1226 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 PCDH12Q9NPG4 1184 aa17.96■□□□□ 0.46
HLA-A-206ENST00000479320 MBNL1Q9NR56 388 aaKnown RBP17.96■□□□□ 0.46
HLA-A-206ENST00000479320 SHROOM3Q8TF72 1996 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 SRRM3A6NNA2 597 aaPredicted RBP17.95■□□□□ 0.46
HLA-A-206ENST00000479320 RIOK3O14730 519 aaKnown RBP17.95■□□□□ 0.46
HLA-A-206ENST00000479320 FFAR2O15552 330 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 CSF2P04141 144 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 SERPINA4P29622 427 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 IGFALSP35858 605 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 SLC10A7Q0GE19 358 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 CAMK2BQ13554 666 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 LBRQ14739 615 aaKnown RBP17.95■□□□□ 0.46
HLA-A-206ENST00000479320 CFAP58Q5T655 872 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 BRAT1Q6PJG6 821 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 PARGQ86W56 976 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 TMPRSS12Q86WS5 348 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
HLA-A-206ENST00000479320 ZNF564Q8TBZ8 553 aaPredicted RBP17.95■□□□□ 0.46
HLA-A-206ENST00000479320 NSMCE3Q96MG7 304 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 ZNF599Q96NL3 588 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 PSKH2Q96QS6 385 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 DNAJC7Q99615 494 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 KLF15Q9UIH9 416 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 COQ6Q9Y2Z9 468 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 FREM2Q5SZK8 3169 aa17.95■□□□□ 0.46
HLA-A-206ENST00000479320 TAF4O00268 1085 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 MAFKO60675 156 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 PEX11BO96011 259 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 NME1P15531 152 aaKnown RBP17.94■□□□□ 0.46
HLA-A-206ENST00000479320 IL4RP24394 825 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 ACP1P24666 158 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 SSR1P43307 286 aaKnown RBP17.94■□□□□ 0.46
HLA-A-206ENST00000479320 SCNN1BP51168 640 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 RENBPP51606 427 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 CLDN6P56747 220 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 YPEL5P62699 121 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 BCL2L1Q07817 233 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 EIF2B5Q13144 721 aaKnown RBP17.94■□□□□ 0.46
HLA-A-206ENST00000479320 ILKQ13418 452 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 TRIM14Q14142 442 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 SLC18A3Q16572 532 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 ASTE1Q2TB18 679 aaPredicted RBP17.94■□□□□ 0.46
HLA-A-206ENST00000479320 TMCO4Q5TGY1 634 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 CPNE8Q86YQ8 564 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 FAM71BQ8TC56 605 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 ECHDC3Q96DC8 303 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 C1QTNF7Q9BXJ2 289 aa17.94■□□□□ 0.46
HLA-A-206ENST00000479320 PACSIN1Q9BY11 444 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms