RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 OR51B4Q9Y5P0 310 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 USP9XQ93008 2570 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 A0A1W2PQU0 124 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 POM121BA6NF01 834 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 KPNA3O00505 521 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 SCAMP1O15126 338 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 RAD51BO15315 384 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 ATP9BO43861 1147 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 MT-CO1P00395 513 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 PRNPP04156 253 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 CALB1P05937 261 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 GP1BAP07359 652 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 MMEP08473 750 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 CDH5P33151 784 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 SOX5P35711 763 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 DNA2P51530 1060 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 COPB1P53618 953 aaKnown RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 GEMIN4P57678 1058 aaKnown RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 CDR2Q01850 454 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 UBXN1Q04323 297 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 EIF4EBP2Q13542 120 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 FZD2Q14332 565 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 KRT31Q15323 416 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 CDKN3Q16667 212 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 FILIP1LQ4L180 1135 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 TMEM259Q4ZIN3 620 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 SETMARQ53H47 684 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 HSP90B2PQ58FF3 399 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 BEND6Q5SZJ8 279 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 ARTNQ5T4W7 220 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 SEL1L3Q68CR1 1132 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 RWDD4Q6NW29 188 aaKnown RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 PPP1R2P3Q6NXS1 205 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 ZNF783Q6ZMS7 281 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 Q6ZVU0 165 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 TFAP2DQ7Z6R9 452 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 ABI3BPQ7Z7G0 1075 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 NOP9Q86U38 636 aaKnown RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 ZNF354CQ86Y25 554 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 RYBPQ8N488 228 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 SH2D3CQ8N5H7 860 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 ZNF548Q8NEK5 533 aaPredicted RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 MAPK15Q8TD08 544 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 BMFQ96LC9 184 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 HAPLN3Q96S86 360 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 CALN1Q9BXU9 219 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 ZYG11BQ9C0D3 744 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 VIPAS39Q9H9C1 493 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 PREBQ9HCU5 417 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
VCP-205ENST00000479300 STARD5Q9NSY2 213 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 PIGVQ9NUD9 493 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 FANCLQ9NW38 375 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 ARHGEF38Q9NXL2 777 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 TBC1D30Q9Y2I9 924 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 MYO9AB2RTY4 2548 aa6.76□□□□□ -1.33
VCP-205ENST00000479300 FAM170AA1A519 330 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 ILVBLA1L0T0 632 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 K7ERQ8 282 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 MCF2LO15068 1137 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 SPINT1O43278 529 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 SUV39H1O43463 412 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 SHOX2O60902 331 aaPredicted RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 CNTN5O94779 1100 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 PCDH8O95206 1070 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 KRT3P12035 628 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 HOXB1P14653 301 aaPredicted RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 FERP16591 822 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 WT1P19544 449 aaPredicted RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 HNRNPH1P31943 449 aaKnown RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 CHRNA3P32297 505 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 GGCXP38435 758 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 MNAT1P51948 309 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 NOMO3P69849 1222 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 ATP11AP98196 1134 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 POLD3Q15054 466 aaPredicted RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 TGIF1Q15583 401 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 CDO1Q16878 200 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 C5orf22Q49AR2 442 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 CDKAL1Q5VV42 579 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 CCDC81Q6ZN84 652 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 Q6ZSR6 202 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 ARCQ7LC44 396 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 EFL1Q7Z2Z2 1120 aaKnown RBP6.75□□□□□ -1.33
VCP-205ENST00000479300 B3GNT8Q7Z7M8 397 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 C14orf80Q86SX3 495 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 HORMAD1Q86X24 394 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 FAM131BQ86XD5 332 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 CEP112Q8N8E3 955 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 DCAF4L2Q8NA75 395 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 CHST14Q8NCH0 376 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 TMIEQ8NEW7 156 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 GIMAP7Q8NHV1 300 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 EPS8L1Q8TE68 723 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 EXTL1Q92935 676 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 VOPP1Q96AW1 172 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 CFAP57Q96MR6 1250 aa6.75□□□□□ -1.33
VCP-205ENST00000479300 PSMB7Q99436 277 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms