RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ZNF189O75820 626 aaPredicted RBP27.04■■□□□ 1.92
CCM2-211ENST00000478582 RBP3P10745 1247 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 ADRB3P13945 408 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 PTPN3P26045 913 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 ATP5OP48047 213 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 ITKQ08881 620 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 WASHC5Q12768 1159 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 TRIM61Q5EBN2 209 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 FBXL19Q6PCT2 694 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 SLC23A3Q6PIS1 610 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 BRAT1Q6PJG6 821 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 CDKL3Q8IVW4 592 aaPredicted RBP27.04■■□□□ 1.92
CCM2-211ENST00000478582 HTR3CQ8WXA8 447 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 NUSAP1Q9BXS6 441 aaKnown RBP27.04■■□□□ 1.92
CCM2-211ENST00000478582 C6orf106Q9H6K1 298 aaPredicted RBP27.04■■□□□ 1.92
CCM2-211ENST00000478582 TTC24A2A3L6 582 aaPredicted RBP27.03■■□□□ 1.92
CCM2-211ENST00000478582 TM4SF5O14894 197 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 HTRA2O43464 458 aaPredicted RBP27.03■■□□□ 1.92
CCM2-211ENST00000478582 AP1G1O43747 822 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 SOCS5O75159 536 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 SUOXP51687 545 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 DUOXA1Q1HG43 343 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 NEK5Q6P3R8 708 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 CEP76Q8TAP6 659 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 TEKT5Q96M29 485 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 ATXN2Q99700 1313 aaKnown RBP27.03■■□□□ 1.92
CCM2-211ENST00000478582 FRMD8P1Q9BZ68 369 aaPredicted RBP27.03■■□□□ 1.92
CCM2-211ENST00000478582 PREBQ9HCU5 417 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 SEPT10Q9P0V9 454 aa27.03■■□□□ 1.92
CCM2-211ENST00000478582 TPX2Q9ULW0 747 aaKnown RBP27.03■■□□□ 1.92
CCM2-211ENST00000478582 A0A1W2PQ67 120 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 TIMP2P16035 220 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 DSC2Q02487 901 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 SYCP2LQ5T4T6 812 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 RABEPKQ7Z6M1 372 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 SLC35B2Q8TB61 432 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 PBKQ96KB5 322 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 R3HDM2Q9Y2K5 976 aaKnown RBP27.02■■□□□ 1.92
CCM2-211ENST00000478582 FADS3Q9Y5Q0 445 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 CACNA1AO00555 2505 aa27.02■■□□□ 1.92
CCM2-211ENST00000478582 DNAH14Q0VDD8 3507 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 ATP1A1P05023 1023 aaKnown RBP27.01■■□□□ 1.91
CCM2-211ENST00000478582 RBL1P28749 1068 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 CXCR5P32302 372 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 CCR5P51681 352 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 NIPAL4Q0D2K0 466 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 KIAA0895LQ68EN5 471 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 TTC7BQ86TV6 843 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 MAIP1Q8WWC4 291 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 DNASE2BQ8WZ79 361 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 AGAP3Q96P47 875 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 FAM118BQ9BPY3 351 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 FERMT1Q9BQL6 677 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 CEP41Q9BYV8 373 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 SLC6A14Q9UN76 642 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.01■■□□□ 1.91
CCM2-211ENST00000478582 TTLL3Q9Y4R7 772 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 PCDHGC4Q9Y5F7 938 aa27.01■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3DA0A087WVF3 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3IA0A087WXS9 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3EA0A087X179 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3KA0A087X1G2 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3FA6NER0 549 aaPredicted RBP27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3LB9A6J9 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 AREL1O15033 823 aa27■■□□□ 1.91
CCM2-211ENST00000478582 CEP104O60308 925 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3HP0C7X1 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 ABL2P42684 1182 aa27■■□□□ 1.91
CCM2-211ENST00000478582 GNG11P61952 73 aa27■■□□□ 1.91
CCM2-211ENST00000478582 POLR2LP62875 67 aaKnown RBP27■■□□□ 1.91
CCM2-211ENST00000478582 IHHQ14623 411 aa27■■□□□ 1.91
CCM2-211ENST00000478582 UGP2Q16851 508 aa27■■□□□ 1.91
CCM2-211ENST00000478582 HS1BP3Q53T59 392 aa27■■□□□ 1.91
CCM2-211ENST00000478582 WDR45BQ5MNZ6 344 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3GQ6DHY5 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3CQ6IPX1 549 aa27■■□□□ 1.91
CCM2-211ENST00000478582 DARS2Q6PI48 645 aaKnown RBP27■■□□□ 1.91
CCM2-211ENST00000478582 RGL4Q8IZJ4 473 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TBC1D3Q8IZP1 549 aaPredicted RBP27■■□□□ 1.91
CCM2-211ENST00000478582 RASGEF1CQ8N431 466 aa27■■□□□ 1.91
CCM2-211ENST00000478582 IMP4Q96G21 291 aaKnown RBP27■■□□□ 1.91
CCM2-211ENST00000478582 SLC25A51Q9H1U9 297 aa27■■□□□ 1.91
CCM2-211ENST00000478582 USP29Q9HBJ7 922 aa27■■□□□ 1.91
CCM2-211ENST00000478582 GLOD4Q9HC38 313 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TMEM9BQ9NQ34 198 aa27■■□□□ 1.91
CCM2-211ENST00000478582 TRHDEQ9UKU6 1024 aa27■■□□□ 1.91
CCM2-211ENST00000478582 MED19A0JLT2 244 aaPredicted RBP26.99■■□□□ 1.91
CCM2-211ENST00000478582 FAM47DPA6NHR8 397 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 C4orf47A7E2U8 309 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 CDX4O14627 284 aaPredicted RBP26.99■■□□□ 1.91
CCM2-211ENST00000478582 FGGP02679 453 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 CFIP05156 583 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 IGHV4-34P06331 123 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 MMP2P08253 660 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 SERPINF2P08697 491 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 TRAF2Q12933 501 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 SIX1Q15475 284 aaPredicted RBP26.99■■□□□ 1.91
CCM2-211ENST00000478582 SLC14A2Q15849 920 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 CFAP58Q5T655 872 aa26.99■■□□□ 1.91
CCM2-211ENST00000478582 TRIM69Q86WT6 500 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms