RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TREX2Q9BQ50 279 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 TMEM204Q9BSN7 226 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 LMAN2LQ9H0V9 348 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 PAPOLBQ9NRJ5 636 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 CNPY2Q9Y2B0 182 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 RGPD8O14715 1765 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 CDC42BPGQ6DT37 1551 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 MYOM2P54296 1465 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 DCCP43146 1447 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 NCOA3Q9Y6Q9 1424 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 NUP155O75694 1391 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZNF335Q9H4Z2 1342 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 KDM3AQ9Y4C1 1321 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 C4orf47A7E2U8 309 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TSPAN4O14817 238 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 USO1O60763 962 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 HLA-DQA2P01906 255 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 CHRM4P08173 479 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 AKR1A1P14550 325 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TFEBP19484 476 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 CHMP24386 653 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 EPHA8P29322 1005 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TYK2P29597 1187 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 GGT5P36269 586 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 CDH15P55291 814 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZXDBP98169 803 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 RHAGQ02094 409 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 NAA25Q14CX7 972 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TSTQ16762 297 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 GPATCH4Q5T3I0 446 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 SLC30A9Q6PML9 568 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 DHRS13Q6UX07 377 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TMTC3Q6ZXV5 915 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 VPS52Q8N1B4 723 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 BCAS4Q8TDM0 211 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 RUFY2Q8WXA3 655 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 EYA3Q99504 573 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 EPHX3Q9H6B9 360 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 Q9N2J8 555 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZDHHC7Q9NXF8 308 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ARL15Q9NXU5 204 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 TAS2R10Q9NYW0 307 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 UPB1Q9UBR1 384 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 FBXO2Q9UK22 296 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 PCDHA12Q9UN75 941 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ICKQ9UPZ9 632 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 NAALADL1Q9UQQ1 740 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ABCA3Q99758 1704 aa4.32□□□□□ -1.72
CDC42BPA-212ENST00000478573 ADGRB2O60241 1585 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 PTCH1Q13635 1447 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 ADAMTS13Q76LX8 1427 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TRBV5-3A0A0A0MS03 114 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 A0A1W2PPH5 198 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TMEM247A6NEH6 219 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 PER2O15055 1255 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TNFSF14O43557 240 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TLX3O43711 291 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 SLC28A2O43868 658 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 HBP1O60381 514 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 PLA2G2AP14555 144 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 PSMA4P25789 261 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 STAT1P42224 750 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 P2RX3P56373 397 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 IL13RA2Q14627 380 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 C10orf76Q5T2E6 689 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 FAM69AQ5T7M9 428 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 CCDC30Q5VVM6 783 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 NUGGCQ68CJ6 796 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 NAPEPLDQ6IQ20 393 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 SLC22A25Q6T423 547 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 C18orf65Q6ZTR6 163 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TRAPPC11Q7Z392 1133 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 RNF144BQ7Z419 303 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 MON1AQ86VX9 555 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 CHD1LQ86WJ1 897 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 KLBQ86Z14 1044 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 DCP1BQ8IZD4 617 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 FAM47BQ8NA70 645 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 SETD9Q8NE22 299 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZMIZ2Q8NF64 920 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 NOC3LQ8WTT2 800 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 CNOT9Q92600 299 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 KAT2BQ92831 832 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 ADAD1Q96M93 576 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 FRG2BQ96QU4 278 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 NR1H4Q96RI1 486 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 CADM1Q9BY67 442 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 AAMDCQ9H7C9 122 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TBC1D14Q9P2M4 693 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 ORC3Q9UBD5 711 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 IPO11Q9UI26 975 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 COL22A1Q8NFW1 1626 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 ASXL1Q8IXJ9 1541 aa4.31□□□□□ -1.72
CDC42BPA-212ENST00000478573 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms