RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 FAM170AA1A519 330 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 CPED1A4D0V7 1026 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 ANKRD62A6NC57 917 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 CDRT15L2A8MXV6 281 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 MMP20O60882 483 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 ANXA6P08133 673 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 TIMP2P16035 220 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 RBMS1P29558 406 aaKnown RBP13.13□□□□□ -0.31
ABCF3-212ENST00000478288 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
ABCF3-212ENST00000478288 KLK7P49862 253 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 RHOAP61586 193 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 PPARDQ03181 441 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 SERINC3Q13530 473 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 TMEM52BQ4KMG9 183 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 C3orf38Q5JPI3 329 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 ESRP1Q6NXG1 681 aaKnown RBP13.13□□□□□ -0.31
ABCF3-212ENST00000478288 WDR59Q6PJI9 974 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 MON1BQ7L1V2 547 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 VPS36Q86VN1 386 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 DNAAF5Q86Y56 855 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 RBFAQ8N0V3 343 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 ZNF843Q8N446 348 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 ARL10Q8N8L6 244 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 ATXN7L3BQ96GX2 97 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 PRR11Q96HE9 360 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-212ENST00000478288 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
ABCF3-212ENST00000478288 PNMA8BQ9ULN7 279 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-212ENST00000478288 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 RASA4BC9J798 803 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 NTN3O00634 580 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 MUSKO15146 869 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 EPHB6O15197 1021 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 YY2O15391 372 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 KLK10O43240 276 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 RASA4O43374 803 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 GJB6O95452 261 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 ALPIP09923 528 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 TSHRP16473 764 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 HK3P52790 923 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 PDX1P52945 283 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 EIF3IQ13347 325 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 LRRC14Q15048 493 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 IRF4Q15306 451 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 ELOCQ15369 112 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 PERM1Q5SV97 790 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 BRAT1Q6PJG6 821 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 ARL14Q8N4G2 192 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 OR6C4Q8NGE1 309 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 WDR36Q8NI36 951 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 SCG3Q8WXD2 468 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 HMCESQ96FZ2 354 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 LIN37Q96GY3 246 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 ZNF641Q96N77 438 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 TUBGCP5Q96RT8 1024 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 PCDHB18PQ96TA0 734 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 CCDC3Q9BQI4 270 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 CNPY3Q9BT09 278 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 MAGEB5Q9BZ81 275 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 CLPBQ9H078 707 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 VPS16Q9H269 839 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 LRRC19Q9H756 370 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 MBNL1Q9NR56 388 aaKnown RBP13.12□□□□□ -0.31
ABCF3-212ENST00000478288 LHX3Q9UBR4 397 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 FZD10Q9ULW2 581 aa13.12□□□□□ -0.31
ABCF3-212ENST00000478288 CCDC187A0A096LP49 1063 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 CFAP69A5D8W1 941 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 CCP110O43303 1012 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 ITGA2BP08514 1039 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 DESP17661 470 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 HTR1BP28222 390 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 NDST2P52849 883 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 CFHR1Q03591 330 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 VAC14Q08AM6 782 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 SPIDRQ14159 915 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 NFATC4Q14934 902 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 SYCP1Q15431 976 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 UGP2Q16851 508 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 WSCD2Q2TBF2 565 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 LRRC73Q5JTD7 316 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 FAXCQ5TGI0 409 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 ERAP2Q6P179 960 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
ABCF3-212ENST00000478288 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 PYROXD2Q8N2H3 581 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms