RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 NEK5Q6P3R8 708 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 DCUN1D2Q6PH85 259 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 KDM7AQ6ZMT4 941 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 LEKR1Q6ZMV7 388 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ERN2Q76MJ5 926 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 IQCHQ86VS3 1027 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PLD5Q8N7P1 536 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ATP11CQ8NB49 1132 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 LRIG1Q96JA1 1093 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 BMFQ96LC9 184 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 HINFPQ9BQA5 517 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 MGME1Q9BQP7 344 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 HEPHQ9BQS7 1158 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF670Q9BS34 389 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 HERPUD2Q9BSE4 406 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ZDHHC5Q9C0B5 715 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 DHX35Q9H5Z1 703 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CATSPERBQ9H7T0 1116 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF395Q9H8N7 513 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 MRPL47Q9HD33 250 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 SUSD2Q9UGT4 822 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 IP6K2Q9UHH9 426 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ANAPC7Q9UJX3 599 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TPX2Q9ULW0 747 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TFR2Q9UP52 801 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ITM2BQ9Y287 266 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ANKRD6Q9Y2G4 727 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 A0A0U1RQJ8 604 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 A0A1B0GTQ1 180 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 C16orf96A6NNT2 1141 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 BTNL10A8MVZ5 291 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 MEI4A8MW99 385 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 H0Y8X5 98 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CREB3O43889 395 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PCDHGA12O60330 932 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RNGTTO60942 597 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 NDUFS2O75306 463 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PIGNO95427 931 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 IL1BP01584 269 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PRNPP04156 253 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 MMP2P08253 660 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ACADMP11310 421 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 AMPD1P23109 780 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 MMP12P39900 470 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RXRGP48443 463 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 HLA-BQ31612 363 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF805Q5CZA5 627 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RETSATQ6NUM9 610 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RWDD4Q6NW29 188 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RAD9BQ6WBX8 426 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RAB44Q7Z6P3 723 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 HORMAD1Q86X24 394 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 C12orf50Q8NA57 414 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 LSM14AQ8ND56 463 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 OR6K2Q8NGY2 324 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 SAP25Q8TEE9 199 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RAPGEF5Q92565 580 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CENPTQ96BT3 561 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CELF6Q96J87 481 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF599Q96NL3 588 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CAMK1GQ96NX5 476 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PSKH2Q96QS6 385 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PANX2Q96RD6 677 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PPP1R9BQ96SB3 815 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ERVMER34-1Q9H9K5 563 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 DMTF1Q9Y222 760 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CA5BQ9Y2D0 317 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PPIL1Q9Y3C6 166 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 A0A0A6YYK5 440 aaPredicted RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 AKR1B15C9JRZ8 316 aaPredicted RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 C1QTNF3-AMACRE9PGA6 284 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 PJA2O43164 708 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 TOP3BO95985 862 aaKnown RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 H2AFZP0C0S5 128 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 ITIH2P19823 946 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 IGFALSP35858 605 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 NUDT1P36639 197 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 AFF3P51826 1226 aaKnown RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 NEK3P51956 506 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 PFN3P60673 137 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 RFTN1Q14699 578 aaPredicted RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 CDKN3Q16667 212 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 POM121L1PQ3SYA9 428 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 BOLA3Q53S33 107 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 SYCP2LQ5T4T6 812 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 LRRC38Q5VT99 294 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 FAM46CQ5VWP2 391 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 KCTD16Q68DU8 428 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 SCYL2Q6P3W7 929 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 KYAT3Q6YP21 454 aaKnown RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 H2AFVQ71UI9 128 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 NAXDQ8IW45 347 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 LRRC57Q8N9N7 239 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 TSEN2Q8NCE0 465 aaKnown RBP4.28□□□□□ -1.72
POLR2B-208ENST00000478188 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
POLR2B-208ENST00000478188 RNF217Q8TC41 542 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms