RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CCDC153Q494R4 210 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC9B1Q4ZJI4 515 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MDH1BQ5I0G3 518 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 GLRA4Q5JXX5 417 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF658Q5TYW1 1059 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CLEC6AQ6EIG7 209 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CTRB2Q6GPI1 263 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 KLHL24Q6TFL4 600 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MAMDC4Q6UXC1 1216 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TAF8Q7Z7C8 310 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 NEK8Q86SG6 692 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 METTL23Q86XA0 190 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 DENND1CQ8IV53 801 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MPP5Q8N3R9 675 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ZCCHC7Q8N3Z6 543 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ARFGAP2Q8N6H7 521 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 IQUBQ8NA54 791 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC24A4Q8NFF2 622 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PPP1R35Q8TAP8 253 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 STT3BQ8TCJ2 826 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 GPT2Q8TD30 523 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 LRTOMTQ8WZ04 291 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ST8SIA4Q92187 359 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC9A6Q92581 669 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SEPT8Q92599 483 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM120BQ96EK7 910 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CYFIP2Q96F07 1278 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 RBM41Q96IZ5 413 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 VCPIP1Q96JH7 1222 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CEP19Q96LK0 163 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TEKT5Q96M29 485 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TMEM68Q96MH6 324 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC2A13Q96QE2 648 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SMC6Q96SB8 1091 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ADOQ96SZ5 270 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PRRX2Q99811 253 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 C19orf43Q9BQ61 176 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TRIM62Q9BVG3 475 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SORBS1Q9BX66 1292 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 KRTAP3-1Q9BYR8 98 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 UNKQ9C0B0 810 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ENKD1Q9H0I2 346 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CARD9Q9H257 536 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 EPC1Q9H2F5 836 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 HIPK3Q9H422 1215 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SNX15Q9NRS6 342 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 RBM12Q9NTZ6 932 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ASNSD1Q9NWL6 643 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PAQR5Q9NXK6 330 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 GPRC5DQ9NZD1 345 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CFAP97Q9P2B7 532 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ASIC3Q9UHC3 531 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SCOCQ9UIL1 159 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TSPYL4Q9UJ04 414 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CPSF3Q9UKF6 684 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ANGPTL2Q9UKU9 493 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC8A2Q9UPR5 921 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF148Q9UQR1 794 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 RUVBL1Q9Y265 456 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 STK38LQ9Y2H1 464 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 NAALAD2Q9Y3Q0 740 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 USP15Q9Y4E8 981 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGB2Q9Y5G2 931 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 SUPT6HQ7KZ85 1726 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CCDC171Q6TFL3 1326 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TTC21AQ8NDW8 1320 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TRAPPC8Q9Y2L5 1435 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ADAMTS20P59510 1910 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 EHBP1L1Q8N3D4 1523 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PLXNC1O60486 1568 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 STRCQ7RTU9 1775 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 UQCRHLA0A096LP55 91 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TTC26A0AVF1 554 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 WDR91A4D1P6 747 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 EME2A4GXA9 379 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TMEM247A6NEH6 219 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC15A5A6NIM6 579 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RHPN2P1A8MT19 583 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 AHRRA9YTQ3 701 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SLCO1B7G3V0H7 640 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 H0YCG3 227 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SCAMP1O15126 338 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 OGTO15294 1046 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ATP8B1O43520 1251 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 NUDT21O43809 227 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TLR2O60603 784 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CYTIPO60759 359 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ITGA10O75578 1167 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RBBP9O75884 186 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 UBXN7O94888 489 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ERLIN2O94905 339 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 GNA14O95837 355 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 FYNP06241 537 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 GLAP06280 429 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 UQCRHP07919 91 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 PABPC4LP0CB38 370 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MYBP10242 640 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 KRT3P12035 628 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 PRG2P13727 222 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 GSPT1P15170 499 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms