RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ASB2Q96Q27 587 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 ZSWIM1Q9BR11 485 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 WACQ9BTA9 647 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 BTBD2Q9BX70 525 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 SIRT5Q9NXA8 310 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 PRPF19Q9UMS4 504 aaKnown RBP12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 COQ4Q9Y3A0 265 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 STYXL1Q9Y6J8 313 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 ATG13O75143 517 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 DAB1O75553 588 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 KRT37O76014 449 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 BMP1P13497 986 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 ADORA2AP29274 412 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 GP5P40197 560 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 MFAP3P55082 362 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 TNFAIP2Q03169 654 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 NME3Q13232 169 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 LAMC2Q13753 1193 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 TBRG1Q3YBR2 411 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 ZFP69Q49AA0 526 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 FSCBQ5H9T9 825 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 MDH1BQ5I0G3 518 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 LYPD8Q6UX82 237 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 BTLAQ7Z6A9 289 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 ZDHHC14Q8IZN3 488 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 BANPQ8N9N5 519 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 FBXL13Q8NEE6 735 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 ZSWIM2Q8NEG5 633 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 OR7D4Q8NG98 312 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 OR6F1Q8NGZ6 308 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 ENKURQ8TC29 256 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 CMTM5Q96DZ9 223 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 TMEM121Q9BTD3 319 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 FBXO8Q9NRD0 319 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 SYBUQ9NX95 663 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 STRIP2Q9ULQ0 834 aa12.77□□□□□ -0.37
RTFDC1-207ENST00000477573 MCM3APO60318 1980 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 C7orf72A4D263 438 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 LRRC72A6NJI9 287 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SPOPO43791 374 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 NDUFS2O75306 463 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ECDO95905 644 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 PROCP04070 461 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 PRKAA2P54646 552 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SSTP61278 116 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 BNIP2Q12982 314 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SIX1Q15475 284 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF792Q3KQV3 632 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 HABP4Q5JVS0 413 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ZBTB8OSQ8IWT0 167 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 CDH26Q8IXH8 852 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 PM20D2Q8IYS1 436 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ZCCHC7Q8N3Z6 543 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 TMEM102Q8N9M5 508 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 LEMD2Q8NC56 503 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ARRDC4Q8NCT1 418 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 OR13F1Q8NGS4 319 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 NT5C1BQ96P26 610 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 CSNK1G3Q9Y6M4 447 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SDR42E2A6NKP2 422 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 HBP1O60381 514 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 CPNE6O95741 557 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 NDST3O95803 873 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 PTTG1O95997 202 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 TNFAIP3P21580 790 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 HTR2BP41595 481 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 MLLT10P55197 1068 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ILF2Q12905 390 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 IKBKEQ14164 716 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 TCEAL1Q15170 157 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ZBTB41Q5SVQ8 909 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 AGAP6Q5VW22 663 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 DCUN1D2Q6PH85 259 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 TTC33Q6PID6 262 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 DEFB107AQ8IZN7 70 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM9CQ8IZT9 166 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SLC30A5Q8TAD4 765 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 AGAP4Q96P64 663 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 GPR88Q9GZN0 384 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 COPS7BQ9H9Q2 264 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms