RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TUBGCP5	Q96RT8	1024 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PRRX2	Q99811	253 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	AGPAT1	Q99943	283 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	RTP3	Q9BQQ7	232 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GPR87	Q9BY21	358 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	B3GNT5	Q9BYG0	378 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	OSBPL2	Q9H1P3	480 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GAN	Q9H2C0	597 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	LHX5	Q9H2C1	402 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	KIF9	Q9HAQ2	790 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CSNK1G1	Q9HCP0	422 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TRPC7	Q9HCX4	862 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	WDR6	Q9NNW5	1121 aa	Known RBP	4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CNGB3	Q9NQW8	809 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GDE1	Q9NZC3	331 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	WDR35	Q9P2L0	1181 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	DNMT3B	Q9UBC3	853 aa	Known RBP	4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	HMGXB4	Q9UGU5	601 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SLC12A6	Q9UHW9	1150 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CAPN11	Q9UMQ6	739 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CNTN6	Q9UQ52	1028 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SIK3	Q9Y2K2	1263 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	USP15	Q9Y4E8	981 aa	Predicted RBP	4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PAXBP1	Q9Y5B6	917 aa		4.69	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SCN1A	P35498	2009 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	COL4A4	P53420	1690 aa	Predicted RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TYW5	A2RUC4	315 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289		O00370	1275 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SLC9A3R1	O14745	358 aa	Predicted RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	FAM20B	O75063	409 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TBX10	O75333	385 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SOAT2	O75908	522 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	NOL4	O94818	638 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ADCY5	O95622	1261 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ZBED1	O96006	694 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MBL2	P11226	248 aa	Predicted RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	HDC	P19113	662 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CASP14	P31944	242 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ATP5C1	P36542	298 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	KLK7	P49862	253 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ZNF75D	P51815	510 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	COG7	P83436	770 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TAF10	Q12962	218 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MTA1	Q13330	715 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SQSTM1	Q13501	440 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SPA17	Q15506	151 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CSRP2	Q16527	193 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PREPL	Q4J6C6	727 aa	Predicted RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	HECTD3	Q5T447	861 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GPR158	Q5T848	1215 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TAF3	Q5VWG9	929 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	OR6B2	Q6IFH4	312 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	DCUN1D2	Q6PH85	259 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SYCE2	Q6PIF2	218 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MRGPRE	Q86SM8	312 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PIGZ	Q86VD9	579 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SLC47A2	Q86VL8	602 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PASD1	Q8IV76	773 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GSPT2	Q8IYD1	628 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	IRGQ	Q8WZA9	623 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SECISBP2L	Q93073	1101 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	C18orf8	Q96DM3	657 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MCRS1	Q96EZ8	462 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MSLNL	Q96KJ4	702 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PPP1R13B	Q96KQ4	1090 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ASB2	Q96Q27	587 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TWNK	Q96RR1	684 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	KCNK16	Q96T55	309 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ELF4	Q99607	663 aa	Predicted RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	DDX50	Q9BQ39	737 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SELENOO	Q9BVL4	669 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	NAA15	Q9BXJ9	866 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	DCLK3	Q9C098	648 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	HSD3B7	Q9H2F3	369 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TASP1	Q9H6P5	420 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GRPEL1	Q9HAV7	217 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ZFP14	Q9HCL3	533 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MRPL47	Q9HD33	250 aa	Known RBP	4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SIX2	Q9NPC8	291 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	ABCC13	Q9NSE7	274 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TMLHE	Q9NVH6	421 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	AIPL1	Q9NZN9	384 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	IGSF9	Q9P2J2	1179 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	B4GALT6	Q9UBX8	382 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	TRPS1	Q9UHF7	1281 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	LCMT1	Q9UIC8	334 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CDH7	Q9ULB5	785 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	STAP1	Q9ULZ2	295 aa		4.68	□□□□□ -1.66
NSMCE4A-208	ENST00000477289		A0A0A6YYJ9	748 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289		A0A0A6YYK5	440 aa	Predicted RBP	4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	CBX4	O00257	560 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	HCRT	O43612	131 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	OPA1	O60313	960 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	RAMP2	O60895	175 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	GLP2R	O95838	553 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	JUN	P05412	331 aa	Known RBP	4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	MYBL1	P10243	752 aa		4.67	□□□□□ -1.66
NSMCE4A-208	ENST00000477289	SLC2A3	P11169	496 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms