RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 POP4O95707 220 aaKnown RBP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 GSRP00390 522 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 GLB1P16278 677 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 ITIH2P19823 946 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 ACVRL1P37023 503 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 CASRP41180 1078 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 SULT1E1P49888 294 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 POLE2P56282 527 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 SRP54P61011 504 aaKnown RBP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 KCNAB2Q13303 367 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 NFATC4Q14934 902 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 MYLK3Q32MK0 819 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 CERCAMQ5T4B2 595 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 ACBD5Q5T8D3 534 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 KCTD16Q68DU8 428 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 GJB7Q6PEY0 223 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 BORAQ6PGQ7 559 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 ENOSF1Q7L5Y1 443 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 RD3Q7Z3Z2 195 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 SPRED1Q7Z699 444 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 TTC7BQ86TV6 843 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 TRIM59Q8IWR1 403 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 CXorf40AQ8TE69 158 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 JPH3Q8WXH2 748 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 DHTKD1Q96HY7 919 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 OSBPL1AQ9BXW6 950 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.5□□□□□ -0.57
BRCA1-213ENST00000476777 TUBD1Q9UJT1 453 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
BRCA1-213ENST00000476777 STMND1H3BQB6 276 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 F9P00740 461 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 PNLIPP16233 465 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 USP8P40818 1118 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 SNX16P57768 344 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 RNASE9P60153 205 aaKnown RBP11.49□□□□□ -0.57
BRCA1-213ENST00000476777 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
BRCA1-213ENST00000476777 DEUP1Q05D60 604 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 C16orf72Q14CZ0 275 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 LRRC14Q15048 493 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 WSCD2Q2TBF2 565 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 C4orf17Q53FE4 359 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 PHF19Q5T6S3 580 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 TTI2Q6NXR4 508 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 OGFOD3Q6PK18 319 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 ENPP7Q6UWV6 458 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 SFTPA2Q8IWL1 248 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 DRC7Q8IY82 874 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 FAM26EQ8N5C1 309 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 OR2AP1Q8NGE2 309 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 HAPLN3Q96S86 360 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 RBM15Q96T37 977 aaKnown RBP eCLIP11.49□□□□□ -0.57
BRCA1-213ENST00000476777 TBCBQ99426 244 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 WRAP53Q9BUR4 548 aaKnown RBP11.49□□□□□ -0.57
BRCA1-213ENST00000476777 ZYG11BQ9C0D3 744 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 SCAND2PQ9GZW5 306 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-213ENST00000476777 SEMA6CQ9H3T2 930 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 SYNCQ9H7C4 482 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 STAP1Q9ULZ2 295 aa11.49□□□□□ -0.57
BRCA1-213ENST00000476777 HIVEP3Q5T1R4 2406 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 SMC2O95347 1197 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 CCL4P13236 92 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 TIMP2P16035 220 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 HTR1BP28222 390 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 ARSDP51689 593 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 STIM1Q13586 685 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 HLTFQ14527 1009 aaKnown RBP eCLIP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 POLD3Q15054 466 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 SLC25A52Q3SY17 297 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 ATXN7L2Q5T6C5 722 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 TMEM164Q5U3C3 297 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 GDPD4Q6W3E5 623 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 ZDHHC17Q8IUH5 632 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 FMR1NBQ8N0W7 255 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 NKD1Q969G9 470 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 PDXPQ96GD0 296 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 CRACR2AQ9BSW2 395 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 APOOQ9BUR5 198 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 NDFIP2Q9NV92 336 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 TMEM51Q9NW97 253 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 LRIT1Q9P2V4 623 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 PPARGC1AQ9UBK2 798 aaKnown RBP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 DKK3Q9UBP4 350 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 KLQ9UEF7 1012 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 ANAPC2Q9UJX6 822 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 COQ6Q9Y2Z9 468 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 OR1A2Q9Y585 309 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.48□□□□□ -0.57
BRCA1-213ENST00000476777 DGKBQ9Y6T7 804 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
BRCA1-213ENST00000476777 POLQO75417 2590 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 NUDT21O43809 227 aaKnown RBP11.47□□□□□ -0.57
BRCA1-213ENST00000476777 TNFP01375 233 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 LIFP15018 202 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 ETFBP38117 255 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms