RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 IMP4Q96G21 291 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 ELMO2Q96JJ3 720 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
TMEM53-208ENST00000476724 ZYG11BQ9C0D3 744 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 C11orf49Q9H6J7 331 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 TMEM248Q9NWD8 314 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 XPR1Q9UBH6 696 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
TMEM53-208ENST00000476724 DLX3O60479 287 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 MAGEA11P43364 429 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 GLRBP48167 497 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 LBX1P52954 281 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 ARPP19P56211 112 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 TBX4P57082 545 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 DNAJB13P59910 316 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 IKBKEQ14164 716 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 LBRQ14739 615 aaKnown RBP16.59■□□□□ 0.25
TMEM53-208ENST00000476724 DDR2Q16832 855 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 GALNT7Q86SF2 657 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 CEP97Q8IW35 865 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 LRRC43Q8N309 656 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 FBXW8Q8N3Y1 598 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 ATP6V0D2Q8N8Y2 350 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 NXNL1Q96CM4 212 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 CCDC126Q96EE4 140 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 OR52B2Q96RD2 323 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 TMEM175Q9BSA9 504 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 ATP13A1Q9HD20 1204 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-208ENST00000476724 MRGBPQ9NV56 204 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 NCKIPSDQ9NZQ3 722 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 SLC2A6Q9UGQ3 507 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 NUDT5Q9UKK9 219 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
TMEM53-208ENST00000476724 GRID2O43424 1007 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 PEX11BO96011 259 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 SERPINH1P50454 418 aaKnown RBP16.58■□□□□ 0.25
TMEM53-208ENST00000476724 C1QTNF8P60827 252 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 TNK2Q07912 1038 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 TBL3Q12788 808 aaKnown RBP16.58■□□□□ 0.25
TMEM53-208ENST00000476724 GSTA3Q16772 222 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 LSM12Q3MHD2 195 aaKnown RBP16.58■□□□□ 0.25
TMEM53-208ENST00000476724 MARC1Q5VT66 337 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 ZNF470Q6ECI4 717 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 PIWIL4Q7Z3Z4 852 aaKnown RBP16.58■□□□□ 0.25
TMEM53-208ENST00000476724 ZNF683Q8IZ20 524 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 TTC1Q99614 292 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 VCXQ9H320 206 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 NOL6Q9H6R4 1146 aaKnown RBP16.58■□□□□ 0.25
TMEM53-208ENST00000476724 ZDHHC2Q9UIJ5 367 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 PRPF19Q9UMS4 504 aaKnown RBP16.58■□□□□ 0.25
TMEM53-208ENST00000476724 CDYLQ9Y232 598 aa16.58■□□□□ 0.25
TMEM53-208ENST00000476724 GOLGA8QA0A0J9YX86 632 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 GOLGA8OA6NCC3 632 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 TRIM43BA6NCK2 446 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 GOLGA8NF8WBI6 632 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 ATP5F1P24539 256 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 CDC25CP30307 473 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 LEPRP48357 1165 aaKnown RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 CLCN5P51795 746 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 EPHB1P54762 984 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 MTTPP55157 894 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 TAS2R39P59534 338 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 SEPT6Q14141 434 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 TSTD2Q5T7W7 516 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 CAPRIN2Q6IMN6 1127 aaKnown RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 ZNF280DQ6N043 979 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 C16orf89Q6UX73 402 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 TRIM43Q96BQ3 446 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 TSPAN17Q96FV3 270 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 LENG8Q96PV6 779 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 SERPINI1Q99574 410 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 LBHD1Q9BQE6 289 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 VCX3BQ9H321 246 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 CWH43Q9H720 699 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 OLA1Q9NTK5 396 aaKnown RBP16.58■□□□□ 0.24
TMEM53-208ENST00000476724 CLIC5Q9NZA1 410 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 IL37Q9NZH6 218 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 PCDHB5Q9Y5E4 795 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 DOCK4Q8N1I0 1966 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 MYLKQ15746 1914 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 MIA3Q5JRA6 1907 aa16.58■□□□□ 0.24
TMEM53-208ENST00000476724 IGLV3-10A0A075B6K4 115 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 TRPC5OSA6NMA1 111 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 SOAT2O75908 522 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 BAG2O95816 211 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 CPB1P15086 417 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 CSF2RAP15509 400 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 PIK3R1P27986 724 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 FAM83EQ2M2I3 478 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 AGAP9Q5VTM2 703 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 FAM117BQ6P1L5 589 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 PRSS55Q6UWB4 352 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-208ENST00000476724 LSMEM2Q8N112 164 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 AGR3Q8TD06 166 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 BTN2A3PQ96KV6 586 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 CRISPLD1Q9H336 500 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms