RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 KRT7P08729 469 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 ATXN1LP0C7T5 689 aaKnown RBP21.36■■□□□ 1.01
LIME1-204ENST00000476183 SCNN1BP51168 640 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 PDK2Q15119 407 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 UGP2Q16851 508 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 TMEM52BQ4KMG9 183 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 ANKRD20A8PQ5CZ79 823 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 KYAT3Q6YP21 454 aaKnown RBP21.36■■□□□ 1.01
LIME1-204ENST00000476183 PTAR1Q7Z6K3 402 aaPredicted RBP21.36■■□□□ 1.01
LIME1-204ENST00000476183 CHCHD4Q8N4Q1 142 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 RFFLQ8WZ73 363 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 RAPGEF5Q92565 580 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 FAF2Q96CS3 445 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 ZNF670Q9BS34 389 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 WRAP53Q9BUR4 548 aaKnown RBP21.36■■□□□ 1.01
LIME1-204ENST00000476183 ATP13A3Q9H7F0 1226 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 PCDH12Q9NPG4 1184 aa21.36■■□□□ 1.01
LIME1-204ENST00000476183 A6NNZ2 444 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 SDC3O75056 442 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 CR2P20023 1033 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 XPAP23025 273 aaPredicted RBP21.35■■□□□ 1.01
LIME1-204ENST00000476183 SEMG2Q02383 582 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 PAFAH1B3Q15102 231 aaKnown RBP21.35■■□□□ 1.01
LIME1-204ENST00000476183 TPRG1LQ5T0D9 272 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 BRAT1Q6PJG6 821 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 RAB44Q7Z6P3 723 aaPredicted RBP21.35■■□□□ 1.01
LIME1-204ENST00000476183 RHOT2Q8IXI1 618 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 PQLC3Q8N755 202 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 CXorf40AQ8TE69 158 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 CENPTQ96BT3 561 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 ECHDC3Q96DC8 303 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 INTUQ9ULD6 942 aa21.35■■□□□ 1.01
LIME1-204ENST00000476183 IGF2RP11717 2491 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 TRAFD1O14545 582 aaPredicted RBP21.34■■□□□ 1.01
LIME1-204ENST00000476183 RIOK3O14730 519 aaKnown RBP21.34■■□□□ 1.01
LIME1-204ENST00000476183 DKK1O94907 266 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 TRIM16O95361 564 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 MAP3K6O95382 1288 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 SERPINA4P29622 427 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 ARHGAP25P42331 645 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 RENBPP51606 427 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 SUOXP51687 545 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 BCL2L1Q07817 233 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 GALNT2Q10471 571 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 ZNF235Q14590 738 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 TCEAL1Q15170 157 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 INAVAQ3KP66 663 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 DENND6BQ8NEG7 585 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 FAM174AQ8TBP5 190 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 MRFAP1L1Q96HT8 127 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 MGME1Q9BQP7 344 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 KLK13Q9UKR3 277 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 COQ6Q9Y2Z9 468 aa21.34■■□□□ 1.01
LIME1-204ENST00000476183 COL5A1P20908 1838 aaPredicted RBP21.34■■□□□ 1.01
LIME1-204ENST00000476183 GOLGA8CPA6NN73 597 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 FPGTO14772 594 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 TNFSF14O43557 240 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 TM7SF2O76062 418 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 KDELR1P24390 212 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 IGFALSP35858 605 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 MMP12P39900 470 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 MAXP61244 160 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 AP1S1P61966 158 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 ELP6Q0PNE2 266 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 CFAP58Q5T655 872 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 MAP7D3Q8IWC1 876 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 EID2Q8N6I1 236 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 LRRN4Q8WUT4 740 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 ADAMTS14Q8WXS8 1223 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 MBNL1Q9NR56 388 aaKnown RBP21.33■■□□□ 1.01
LIME1-204ENST00000476183 FTSJ1Q9UET6 329 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 APOBEC2Q9Y235 224 aaKnown RBP21.33■■□□□ 1.01
LIME1-204ENST00000476183 ATP8A1Q9Y2Q0 1164 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 HYOU1Q9Y4L1 999 aa21.33■■□□□ 1.01
LIME1-204ENST00000476183 C3orf70A6NLC5 250 aaPredicted RBP21.32■■□□□ 1
LIME1-204ENST00000476183 HSPA9P38646 679 aaKnown RBP21.32■■□□□ 1
LIME1-204ENST00000476183 GARSP41250 739 aaKnown RBP21.32■■□□□ 1
LIME1-204ENST00000476183 MAGEA1P43355 309 aa21.32■■□□□ 1
LIME1-204ENST00000476183 RABIFP47224 123 aa21.32■■□□□ 1
LIME1-204ENST00000476183 PFN3P60673 137 aa21.32■■□□□ 1
LIME1-204ENST00000476183 GBE1Q04446 702 aa21.32■■□□□ 1
LIME1-204ENST00000476183 FZD2Q14332 565 aa21.32■■□□□ 1
LIME1-204ENST00000476183 ZNF542PQ5EBM4 170 aa21.32■■□□□ 1
LIME1-204ENST00000476183 ZFYVE27Q5T4F4 411 aa21.32■■□□□ 1
LIME1-204ENST00000476183 LRRC49Q8IUZ0 686 aa21.32■■□□□ 1
LIME1-204ENST00000476183 SLC25A45Q8N413 288 aa21.32■■□□□ 1
LIME1-204ENST00000476183 TEX26Q8N6G2 289 aa21.32■■□□□ 1
LIME1-204ENST00000476183 TP53I13Q8NBR0 393 aaPredicted RBP21.32■■□□□ 1
LIME1-204ENST00000476183 NUDCD1Q96RS6 583 aa21.32■■□□□ 1
LIME1-204ENST00000476183 NOD2Q9HC29 1040 aa21.32■■□□□ 1
LIME1-204ENST00000476183 UCKL1Q9NWZ5 548 aa21.32■■□□□ 1
LIME1-204ENST00000476183 TFR2Q9UP52 801 aa21.32■■□□□ 1
LIME1-204ENST00000476183 PCDHGC4Q9Y5F7 938 aa21.32■■□□□ 1
LIME1-204ENST00000476183 WDFY3Q8IZQ1 3526 aa21.32■■□□□ 1
LIME1-204ENST00000476183 USP24Q9UPU5 2620 aa21.31■■□□□ 1
LIME1-204ENST00000476183 SPTY2D1-AS1A0A0U1RR47 76 aa21.31■■□□□ 1
LIME1-204ENST00000476183 LRRD1A4D1F6 860 aa21.31■■□□□ 1
LIME1-204ENST00000476183 LCA5LO95447 670 aa21.31■■□□□ 1
LIME1-204ENST00000476183 C6P13671 934 aa21.31■■□□□ 1
LIME1-204ENST00000476183 DGKAP23743 735 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms