RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 ARFGAP2Q8N6H7 521 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 EPS8L3Q8TE67 593 aaKnown RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 UCMAQ8WVF2 138 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 TADA1Q96BN2 335 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 ZNF669Q96BR6 464 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 RMDN1Q96DB5 314 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 EXOC2Q96KP1 924 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 LMLNQ96KR4 655 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 RANBP9Q96S59 729 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 FAM83CQ9BQN1 747 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 TRMT61BQ9BVS5 477 aaKnown RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 CIPCQ9C0C6 399 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 EBF3Q9H4W6 596 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 ATP13A3Q9H7F0 1226 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 ECT2Q9H8V3 914 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 NOD2Q9HC29 1040 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 MRM3Q9HC36 420 aaKnown RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 PIH1D1Q9NWS0 290 aaKnown RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 TXNDC16Q9P2K2 825 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 PSMC3IPQ9P2W1 217 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 FBXO10Q9UK96 956 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 CLEC4EQ9ULY5 219 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 SOX13Q9UN79 622 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 PLA2G4CQ9UP65 541 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 HS3ST2Q9Y278 367 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 SLC27A6Q9Y2P4 619 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
MRPL55-227ENST00000475832 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
MRPL55-227ENST00000475832 DOCK4Q8N1I0 1966 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 IQANK1A0A1B0GTG1 560 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 A0A1W2PQ67 120 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 TCRBV9S1A1TA0A576 114 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 MUSKO15146 869 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 CRTAMO95727 393 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 SRCP12931 536 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 ARSAP15289 507 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 TPH1P17752 444 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 CR2P20023 1033 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 PRKCHP24723 683 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 SERPINA4P29622 427 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 RPL26P61254 145 aaKnown RBP12.34□□□□□ -0.43
MRPL55-227ENST00000475832 CRADDP78560 199 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 MGAT5Q09328 741 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 POU6F1Q14863 301 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 CRYMQ14894 314 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 EIF4HQ15056 248 aaKnown RBP12.34□□□□□ -0.43
MRPL55-227ENST00000475832 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 SIRPB2Q5JXA9 342 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 PKN3Q6P5Z2 889 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 NCEH1Q6PIU2 408 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 KIAA0907Q7Z7F0 614 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-227ENST00000475832 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 MPP5Q8N3R9 675 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 OR2AP1Q8NGE2 309 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 CSGALNACT1Q8TDX6 532 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 LRRC3BQ96PB8 259 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 KIFC1Q9BW19 673 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 TDRD1Q9BXT4 1180 aaKnown RBP12.34□□□□□ -0.43
MRPL55-227ENST00000475832 NSMCE4AQ9NXX6 385 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 VPS18Q9P253 973 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
MRPL55-227ENST00000475832 RPL26L1Q9UNX3 145 aaKnown RBP12.34□□□□□ -0.43
MRPL55-227ENST00000475832 ERVW-1Q9UQF0 538 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 TCAF1Q9Y4C2 921 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
MRPL55-227ENST00000475832 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 PRR23AA6NEV1 266 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 SOCS5O75159 536 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 TULP3O75386 442 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 KRT38O76015 456 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ALDH1A2O94788 518 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 POP4O95707 220 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 CD160O95971 181 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 MT-CO1P00395 513 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 DLDP09622 509 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 KRT15P19012 456 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 NFKBIAP25963 317 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 CNTFP26441 200 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 GDI1P31150 447 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 EIF2DP41214 584 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 SERPINB9P50453 376 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 PDE1BQ01064 536 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 OLIG2Q13516 323 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 GRM2Q14416 872 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 DLG2Q15700 870 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ITPRIPL2Q3MIP1 535 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ANKRD20A4Q4UJ75 823 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 CARD16Q5EG05 197 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms