RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 INPP5AQ14642 412 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ACAP1Q15027 740 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 IRF4Q15306 451 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 TCEA2Q15560 299 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 STX1AQ16623 288 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ISXQ2M1V0 245 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 TBC1D25Q3MII6 688 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 PRRT3Q5FWE3 981 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ZCCHC8Q6NZY4 707 aaKnown RBP7.09□□□□□ -1.27
HDAC3-207ENST00000475549 DCUN1D2Q6PH85 259 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 CRTC1Q6UUV9 634 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 RFX8Q6ZV50 586 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ZNF571Q7Z3V5 609 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ZNF354CQ86Y25 554 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 SFTPA2Q8IWL1 248 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ARHGAP12Q8IWW6 846 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 SPACA3Q8IXA5 215 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 SLC35F3Q8IY50 421 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 AOPEPQ8N6M6 819 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 PLA2G15Q8NCC3 412 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 TSEN2Q8NCE0 465 aaKnown RBP7.09□□□□□ -1.27
HDAC3-207ENST00000475549 DENND6BQ8NEG7 585 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 MAPK15Q8TD08 544 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 HCAR2Q8TDS4 363 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 CASKIN2Q8WXE0 1202 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ATXN7L3BQ96GX2 97 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 PRR11Q96HE9 360 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-207ENST00000475549 KCTD15Q96SI1 283 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-207ENST00000475549 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 HAUS4Q9H6D7 363 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 PCDH12Q9NPG4 1184 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ASCL3Q9NQ33 180 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 TMEM63CQ9P1W3 806 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 PCSK1NQ9UHG2 260 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 IPO11Q9UI26 975 aaKnown RBP7.09□□□□□ -1.27
HDAC3-207ENST00000475549 RABGEF1Q9UJ41 708 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 SALL4Q9UJQ4 1053 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 OR1A2Q9Y585 309 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 KNTC1P50748 2209 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ADAMTS20P59510 1910 aa7.09□□□□□ -1.27
HDAC3-207ENST00000475549 ATMQ13315 3056 aa7.09□□□□□ -1.28
HDAC3-207ENST00000475549 LMO7DNF2Z398 122 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 EEF2KO00418 725 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 TRAFD1O14545 582 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 FGF10O15520 208 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 DXOO77932 396 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 IGSF6O95976 241 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PEX11BO96011 259 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 FTLP02792 175 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ALPPL2P10696 532 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 SKILP12757 684 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 C6P13671 934 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ERCC2P18074 760 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 TNFAIP3P21580 790 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PSMA2P25787 234 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 IL1R2P27930 398 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 MIPP30301 263 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 LIG3P49916 1009 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 HK3P52790 923 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 NDST2P52849 883 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 THOP1P52888 689 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 AIF1P55008 147 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 TPI1P60174 286 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 YPEL5P62699 121 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 GABREP78334 506 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 TYRO3Q06418 890 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 SLC10A7Q0GE19 358 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 CCDC173Q0VFZ6 552 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PTK2BQ14289 1009 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 LRRC14Q15048 493 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 AGERQ15109 404 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PTPRRQ15256 657 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ALG11Q2TAA5 492 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ANO6Q4KMQ2 910 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 C6orf132Q5T0Z8 1188 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ERMARDQ5T6L9 678 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 TXNRD3NBQ6F5E7 133 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 MACC1Q6ZN28 852 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 EFL1Q7Z2Z2 1120 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ZSCAN30Q86W11 494 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PELI3Q8N2H9 469 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 CXorf40AQ8TE69 158 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 TSACCQ96A04 125 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ECHDC3Q96DC8 303 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ARHGEF26Q96DR7 871 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 VCPIP1Q96JH7 1222 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF641Q96N77 438 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 SLC46A1Q96NT5 459 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 IL12RB2Q99665 862 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 SNRNP25Q9BV90 132 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ABCG4Q9H172 646 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 CATSPERBQ9H7T0 1116 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 USP29Q9HBJ7 922 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 PARVAQ9NVD7 372 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 AIPL1Q9NZN9 384 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 CWC15Q9P013 229 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 SPASTQ9UBP0 616 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 UBA2Q9UBT2 640 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms