RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 SKOR2Q2VWA4 1001 aaPredicted RBP12.38□□□□□ -0.43
SSR1-205ENST00000475213 BOLA3Q53S33 107 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 ZNF542PQ5EBM4 170 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 TXNRD3NBQ6F5E7 133 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
SSR1-205ENST00000475213 POLNQ7Z5Q5 900 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 TP53INP2Q8IXH6 220 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
SSR1-205ENST00000475213 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 HCAR2Q8TDS4 363 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 CXorf40AQ8TE69 158 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 HSPH1Q92598 858 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 IFT43Q96FT9 208 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 NUP85Q9BW27 656 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 SUV39H2Q9H5I1 410 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 SP110Q9HB58 689 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 ANAPC7Q9UJX3 599 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 APC2O95996 2303 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 LAMA5O15230 3695 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 PKD1L2Q7Z442 2459 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 SPTY2D1-AS1A0A0U1RR47 76 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TSPAN11A1L157 253 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 FAM149AA5PLN7 773 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 H3BRJ5 948 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TRIM38O00635 465 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TM7SF2O76062 418 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 C1SP09871 688 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 RARAP10276 462 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 CKMT2P17540 419 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 AMPD1P23109 780 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 ARL4AP40617 200 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 CSNK1DP48730 415 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 IL10RBQ08334 325 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
SSR1-205ENST00000475213 PDE1CQ14123 709 aaPredicted RBP12.37□□□□□ -0.43
SSR1-205ENST00000475213 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TMEM52BQ4KMG9 183 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TPRG1LQ5T0D9 272 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 CCDC122Q5T0U0 273 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 KDM7AQ6ZMT4 941 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 SRLQ86TD4 932 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 LZTR1Q8N653 840 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 NIPA2Q8N8Q9 360 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 OR4C6Q8NH72 309 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TEKT4Q8WW24 435 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 TUBGCP5Q96RT8 1024 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 CINPQ9BW66 212 aaPredicted RBP12.37□□□□□ -0.43
SSR1-205ENST00000475213 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.437e-7■□□□□ 11
SSR1-205ENST00000475213 ETNK2Q9NVF9 386 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 DNAJC28Q9NX36 388 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 IP6K2Q9UHH9 426 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
SSR1-205ENST00000475213 NENFQ9UMX5 172 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.43
SSR1-205ENST00000475213 CELSR3Q9NYQ7 3312 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 ASXL3Q9C0F0 2248 aa12.37□□□□□ -0.43
SSR1-205ENST00000475213 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 TAF4O00268 1085 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 FFAR2O15552 330 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 TPM3P06753 285 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 GIMD1P0DJR0 217 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 CDK4P11802 303 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 XPAP23025 273 aaPredicted RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 ACP1P24666 158 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 HNRNPH3P31942 346 aaKnown RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 IGFALSP35858 605 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 SUOXP51687 545 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 CLDN6P56747 220 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 PFN3P60673 137 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 HNRNPKP61978 463 aaKnown RBP eCLIP12.36□□□□□ -0.431e-8■■■□□ 16
SSR1-205ENST00000475213 SLC25A11Q02978 314 aaKnown RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 ELP6Q0PNE2 266 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 RFTN1Q14699 578 aaPredicted RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 UGP2Q16851 508 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 PARGQ86W56 976 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 TMPRSS12Q86WS5 348 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 ZSWIM9Q86XI8 627 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 CAMK1DQ8IU85 385 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 TP53I13Q8NBR0 393 aaPredicted RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 ZNF641Q96N77 438 aaPredicted RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 CSPG4P5Q96PW8 444 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 ATP13A3Q9H7F0 1226 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 PCDH12Q9NPG4 1184 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
SSR1-205ENST00000475213 KLF15Q9UIH9 416 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 COQ6Q9Y2Z9 468 aa12.36□□□□□ -0.43
SSR1-205ENST00000475213 MYO1FO00160 1098 aa12.35□□□□□ -0.43
SSR1-205ENST00000475213 SCAMP1O15126 338 aa12.35□□□□□ -0.43
SSR1-205ENST00000475213 MUSKO15146 869 aa12.35□□□□□ -0.43
SSR1-205ENST00000475213 CSF2P04141 144 aa12.35□□□□□ -0.43
SSR1-205ENST00000475213 NME1P15531 152 aaKnown RBP12.35□□□□□ -0.43
SSR1-205ENST00000475213 SERPINA4P29622 427 aa12.35□□□□□ -0.43
SSR1-205ENST00000475213 EIF4A3P38919 411 aaKnown RBP12.35□□□□□ -0.43
SSR1-205ENST00000475213 NSUN2Q08J23 767 aaKnown RBP eCLIP12.35□□□□□ -0.43
SSR1-205ENST00000475213 EIF2B5Q13144 721 aaKnown RBP12.35□□□□□ -0.43
SSR1-205ENST00000475213 ILKQ13418 452 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms