RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CLP1Q92989 425 aaKnown RBP21.91■■□□□ 1.1
CCM2-206ENST00000474617 TRIM43Q96BQ3 446 aaPredicted RBP21.91■■□□□ 1.1
CCM2-206ENST00000474617 GCNAQ96QF7 691 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 TRIB3Q96RU7 358 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 C19orf43Q9BQ61 176 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 MRPL57Q9BQC6 102 aaKnown RBP21.91■■□□□ 1.1
CCM2-206ENST00000474617 ADGRE3Q9BY15 652 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 TASP1Q9H6P5 420 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 POPDC3Q9HBV1 291 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 OXSMQ9NWU1 459 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 DNAJC28Q9NX36 388 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 SLC2A6Q9UGQ3 507 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 LZTS1Q9Y250 596 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 VPS9D1Q9Y2B5 631 aa21.91■■□□□ 1.1
CCM2-206ENST00000474617 C2orf78A6NCI8 922 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 SOBPA7XYQ1 873 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 G3V2L1 256 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 GFRA2O00451 464 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 RPP40O75818 363 aaKnown RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 FGF18O76093 207 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 KCNA4P22459 653 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 CALB2P22676 271 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 CTBP1Q13363 440 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 PPIGQ13427 754 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCM2-206ENST00000474617 KLC3Q6P597 504 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 TMEM150AQ86TG1 271 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 DENND6AQ8IWF6 608 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 CPXM2Q8N436 756 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 PDCD6IPQ8WUM4 868 aaKnown RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 ZFRQ96KR1 1074 aaKnown RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 MUC3BQ9H195 1237 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 SCUBE2Q9NQ36 999 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 HACD3Q9P035 362 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 SLCO1B7G3V0H7 640 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 GOLGA8TH3BQL2 631 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 PFDN6O15212 129 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 LRG1P02750 347 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 SERPINA6P08185 405 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 HDCP19113 662 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 PTPN4P29074 926 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 SERPINB3P29508 390 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 MAPK8P45983 427 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 ELF3P78545 371 aaPredicted RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 MPP1Q00013 466 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 CTC1Q2NKJ3 1217 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 AGAP9Q5VTM2 703 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 CXorf57Q6NSI4 855 aaKnown RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 FAM45BPQ6NSW5 357 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 KDELC2Q7Z4H8 507 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 SDCCAG8Q86SQ7 713 aaPredicted RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 FAM45AQ8TCE6 357 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 NSL1Q96IY1 281 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 ELMO2Q96JJ3 720 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 TCF12Q99081 682 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 EMILIN2Q9BXX0 1053 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 MRPL46Q9H2W6 279 aaKnown RBP21.9■■□□□ 1.1
CCM2-206ENST00000474617 CAB39LQ9H9S4 337 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 IL21Q9HBE4 155 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 GKN1Q9NS71 199 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 INSL6Q9Y581 213 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 IRAK3Q9Y616 596 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 ANAPC1Q9H1A4 1944 aa21.9■■□□□ 1.1
CCM2-206ENST00000474617 PLXNA4Q9HCM2 1894 aa21.89■■□□□ 1.1
CCM2-206ENST00000474617 LUC7L3O95232 432 aaKnown RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 GLP2RO95838 553 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 TOP3BO95985 862 aaKnown RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 RBP1P09455 135 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 AQP5P55064 265 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 IRX4P78413 519 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 TAF1AQ15573 450 aaPredicted RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 RNF219Q5W0B1 726 aaPredicted RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 FBXW10Q5XX13 1052 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 FAM117BQ6P1L5 589 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 PARP9Q8IXQ6 854 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 PLD6Q8N2A8 252 aaKnown RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 DCAF4L2Q8NA75 395 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 MAGEC3Q8TD91 643 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 TMA16Q96EY4 203 aaKnown RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 INTS10Q9NVR2 710 aaKnown RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 HAO1Q9UJM8 370 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.89■■□□□ 1.09
CCM2-206ENST00000474617 KIAA1671Q9BY89 1806 aa21.89■■□□□ 1.09
CCM2-206ENST00000474617 H0Y626 953 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 MUSKO15146 869 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 DDX6P26196 483 aaKnown RBP eCLIP21.88■■□□□ 1.09
CCM2-206ENST00000474617 DNAJB13P59910 316 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 ITGA9Q13797 1035 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 LRRC8EQ6NSJ5 796 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 HTR3DQ70Z44 454 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 SLC41A1Q8IVJ1 513 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 OR6P1Q8NGX9 317 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 TDRD1Q9BXT4 1180 aaKnown RBP21.88■■□□□ 1.09
CCM2-206ENST00000474617 TLE6Q9H808 572 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 RUVBL2Q9Y230 463 aaKnown RBP21.88■■□□□ 1.09
CCM2-206ENST00000474617 DNAJC16Q9Y2G8 782 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 RWDD3Q9Y3V2 267 aa21.88■■□□□ 1.09
CCM2-206ENST00000474617 CCDC189A1A4V9 331 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 C2orf81A6NN90 581 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 FCHO1O14526 889 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 HSPA4LO95757 839 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms