RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 TRADDQ15628 312 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 HIF1AQ16665 826 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 POM121L1PQ3SYA9 428 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 DNAJC21Q5F1R6 531 aaKnown RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 C9orf64Q5T6V5 341 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 ZNF776Q68DI1 518 aaPredicted RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 KCTD11Q693B1 232 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 GDPD4Q6W3E5 623 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 CCDC25Q86WR0 208 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 CAMK1DQ8IU85 385 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 MMAAQ8IVH4 418 aaKnown RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 PDIK1LQ8N165 341 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 SLC25A41Q8N5S1 370 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 MCUQ8NE86 351 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 FLCNQ8NFG4 579 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 PJA1Q8NG27 643 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 OR52K1Q8NGK4 314 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 PIP4K2CQ8TBX8 421 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 ART4Q93070 314 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 PPP1R16AQ96I34 528 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 LRIG1Q96JA1 1093 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 ZNF641Q96N77 438 aaPredicted RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 KLHL32Q96NJ5 620 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 SERPINB12Q96P63 405 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 NELL2Q99435 816 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 ADGRE3Q9BY15 652 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 FRMD8Q9BZ67 464 aaPredicted RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 CPEB1Q9BZB8 566 aaKnown RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 FBRSQ9HAH7 460 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 LMAN1LQ9HAT1 526 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 PRSS16Q9NQE7 514 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 DYRK4Q9NR20 520 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 PIH1D1Q9NWS0 290 aaKnown RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 NFU1Q9UMS0 254 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 CHKBQ9Y259 395 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 ARIH1Q9Y4X5 557 aaPredicted RBP8.41□□□□□ -1.06
CNN3-205ENST00000474409 PCDHB9Q9Y5E1 797 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 WASF2Q9Y6W5 498 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 PI4KAP42356 2102 aa8.41□□□□□ -1.06
CNN3-205ENST00000474409 A0A1W2PQ67 120 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 TCRBV21S2A2A0A5A6 115 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 BHMG1C9JSJ3 638 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 CTIFO43310 598 aaKnown RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 ATG13O75143 517 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 PPFIA2O75334 1257 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 PGLSO95336 258 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 NDST3O95803 873 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 ADH1BP00325 375 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 AGTP01019 485 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 SLC4A1P02730 911 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 TUBBP07437 444 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 CTSLP07711 333 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 CHRM1P11229 460 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 COL9A1P20849 921 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 ITGB7P26010 798 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 CHRNA4P43681 627 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 GRIA4P48058 902 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 SESN2P58004 480 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 CAMK2GQ13555 558 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 SEPT6Q14141 434 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 SLC1A5Q15758 541 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 BBS9Q3SYG4 887 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 TTC31Q49AM3 519 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 MAP9Q49MG5 647 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 ZNF805Q5CZA5 627 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 SIRPB2Q5JXA9 342 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 FAM46CQ5VWP2 391 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 KIAA1211LQ6NV74 962 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 WDR93Q6P2C0 686 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 LRRC8BQ6P9F7 803 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 BRAT1Q6PJG6 821 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 ZDHHC24Q6UX98 284 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 CEP128Q6ZU80 1094 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 USP45Q70EL2 814 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 CENPUQ71F23 418 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 ZNF534Q76KX8 674 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 KLHDC8BQ8IXV7 354 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 NDUFAF2Q8N183 169 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 ZCCHC9Q8N567 271 aaKnown RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 TMIEQ8NEW7 156 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 PPHLN1Q8NEY8 458 aaKnown RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 OR2T3Q8NH03 318 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 TADA1Q96BN2 335 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 PARD6BQ9BYG5 372 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 FOXP3Q9BZS1 431 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 RSPH9Q9H1X1 276 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 NEUROG2Q9H2A3 272 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 POLMQ9NP87 494 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 ZDHHC18Q9NUE0 388 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 BFARQ9NZS9 450 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
CNN3-205ENST00000474409 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.06
CNN3-205ENST00000474409 MTF2Q9Y483 593 aaPredicted RBP8.4□□□□□ -1.06
CNN3-205ENST00000474409 ADAMTS9Q9P2N4 1935 aa8.39□□□□□ -1.07
CNN3-205ENST00000474409 LOC285095A0A1B0GVY8 99 aa8.39□□□□□ -1.07
CNN3-205ENST00000474409 A0A1W2PQF6 199 aa8.39□□□□□ -1.07
CNN3-205ENST00000474409 TSPAN11A1L157 253 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms