RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	CLDN16	Q9Y5I7	305 aa		3.77	□□□□□ -1.81
TMEM50B-208	ENST00000474272	C17orf113	A0A1B0GUU1	675 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PLSCR5	A0PG75	271 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DENND3	A2RUS2	1198 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PABPN1L	A6NDY0	278 aa	Known RBP	3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	GAGE10	A6NGK3	116 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TEX22	C9J3V5	150 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	LDLRAD4	O15165	306 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TNFSF14	O43557	240 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CEP104	O60308	925 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CBX6	O95503	412 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CHRNB2	P17787	502 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SLC16A2	P36021	539 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SKIV2L2	P42285	1042 aa	Known RBP	3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	RXRG	P48443	463 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	EFNA5	P52803	228 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CDH15	P55291	814 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TRAF3	Q13114	568 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	HNF4G	Q14541	408 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TST	Q16762	297 aa	Known RBP	3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	ME3	Q16798	604 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SYTL3	Q4VX76	610 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	FJX1	Q86VR8	437 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	ARMC8	Q8IUR7	673 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	GHDC	Q8N2G8	530 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CLIP4	Q8N3C7	705 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	KDM1B	Q8NB78	822 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TNIP2	Q8NFZ5	429 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	ZCCHC10	Q8TBK6	192 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	RFFL	Q8WZ73	363 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	HSPH1	Q92598	858 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TEFM	Q96QE5	360 aa	Known RBP	3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	ATP8A2	Q9NTI2	1148 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	OCIAD1	Q9NX40	245 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	GRHL1	Q9NZI5	618 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	HCN3	Q9P1Z3	774 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DHDH	Q9UQ10	334 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	NAALADL1	Q9UQQ1	740 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	MST1R	Q04912	1400 aa		3.76	□□□□□ -1.81
TMEM50B-208	ENST00000474272	STMND1	H3BQB6	276 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	RTN3	O95197	1032 aa	Predicted RBP	3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SERPINC1	P01008	464 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CGA	P01215	116 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	LCK	P06239	509 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CAPN3	P20807	821 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	EPHA8	P29322	1005 aa	Predicted RBP	3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PAFAH1B1	P43034	410 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DLX5	P56178	289 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	ZP1	P60852	638 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	EFNB1	P98172	346 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DSC1	Q08554	894 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PTP4A2	Q12974	167 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PLCB4	Q15147	1175 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DUSP6	Q16828	381 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	ZNF672	Q499Z4	452 aa	Predicted RBP	3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	FSCB	Q5H9T9	825 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	FAAH2	Q6GMR7	532 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	AAGAB	Q6PD74	315 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TBC1D1	Q86TI0	1168 aa	Predicted RBP	3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CHD1L	Q86WJ1	897 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CPXM2	Q8N436	756 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	LRRC57	Q8N9N7	239 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	NFKBID	Q8NI38	313 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	C7orf26	Q96N11	449 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	B3GNT4	Q9C0J1	378 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CATSPERB	Q9H7T0	1116 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PPP1R14D	Q9NXH3	145 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	PEMT	Q9UBM1	199 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	HSPB7	Q9UBY9	170 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	FBXO40	Q9UH90	709 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SARDH	Q9UL12	918 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CAMK2A	Q9UQM7	478 aa		3.75	□□□□□ -1.81
TMEM50B-208	ENST00000474272	KDM3A	Q9Y4C1	1321 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272		A0A0B4J293	547 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CBY3	A6NI87	242 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	KRTAP9-6	A8MVA2	160 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TSPAN4	O14817	238 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TMCC1	O94876	653 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	UNG	P13051	313 aa	Predicted RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	HARS2	P49590	506 aa	Known RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CCR9	P51686	369 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CLCNKB	P51801	687 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	UFM1	P61960	85 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SLC18A2	Q05940	514 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	MAPRE1	Q15691	268 aa	Known RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	SLC9B1	Q4ZJI4	515 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TDRD12	Q587J7	1177 aa	Known RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	GPATCH4	Q5T3I0	446 aa	Known RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TMEM268	Q5VZI3	342 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TMEM71	Q6P5X7	295 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	TMEM81	Q6P7N7	255 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	INO80C	Q6PI98	192 aa	Predicted RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DSTYK	Q6XUX3	929 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	MOB3C	Q70IA8	216 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	R3HCC1L	Q7Z5L2	792 aa	Known RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	IGFN1	Q86VF2	1251 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	CAMK1D	Q8IU85	385 aa		3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	MUC20	Q8N307	709 aa	Predicted RBP	3.74	□□□□□ -1.81
TMEM50B-208	ENST00000474272	DNAAF1	Q8NEP3	725 aa		3.74	□□□□□ -1.81

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