RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 RANBP10Q6VN20 620 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 JAMLQ86YT9 394 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 KLHL7Q8IXQ5 586 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 AGGF1Q8N302 714 aaeCLIP10.45□□□□□ -0.741e-7■■□□□ 13
CASC3-204ENST00000474190 TAB3Q8N5C8 712 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 ZBTB44Q8NCP5 570 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 RLN3Q8WXF3 142 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 CPT1BQ92523 772 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 ATOH1Q92858 354 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 FUBP1Q96AE4 644 aaKnown RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 SIPA1Q96FS4 1042 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 ZNF641Q96N77 438 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 MCCC1Q96RQ3 725 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 KRT12Q99456 494 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 TRIM51Q9BSJ1 452 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 TPSD1Q9BZJ3 242 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 PCDH9Q9HC56 1237 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 POLMQ9NP87 494 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 RRAGDQ9NQL2 400 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 FBXO4Q9UKT5 387 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 SLC8A2Q9UPR5 921 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 ITM2BQ9Y287 266 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
CASC3-204ENST00000474190 FADS3Q9Y5Q0 445 aa10.45□□□□□ -0.74
CASC3-204ENST00000474190 KMT2BQ9UMN6 2715 aaPredicted RBP10.44□□□□□ -0.74
CASC3-204ENST00000474190 CCDC188H7C350 402 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 TTI1O43156 1089 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 HRO43593 1189 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 LILRB5O75023 590 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 TMEM63AO94886 807 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 SUN1O94901 812 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ADH1BP00325 375 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 AGTP01019 485 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 KRT14P02533 472 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 PRNPP04156 253 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ADRB3P13945 408 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 BCKDHBP21953 392 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 LHCGRP22888 699 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 CES1P23141 567 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ACSL1P33121 698 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 MAPK8P45983 427 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 SEMG2Q02383 582 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 CSTF1Q05048 431 aaKnown RBP10.44□□□□□ -0.74
CASC3-204ENST00000474190 PTK6Q13882 451 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 TUBB2AQ13885 445 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 FGL2Q14314 439 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 SPARCL1Q14515 664 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ANGPT1Q15389 498 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 UGP2Q16851 508 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 MICALCLQ6ZW33 695 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 USP30Q70CQ3 517 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ERN2Q76MJ5 926 aaKnown RBP10.44□□□□□ -0.74
CASC3-204ENST00000474190 WDR5BQ86VZ2 330 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 MMGT1Q8N4V1 131 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 HCAR2Q8TDS4 363 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 NSMCE1Q8WV22 266 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 SEC14L1Q92503 715 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 TUBB2BQ9BVA1 445 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 OSBPL1AQ9BXW6 950 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 EBF2Q9HAK2 575 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ARNT2Q9HBZ2 717 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 VPS45Q9NRW7 570 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 WSB2Q9NYS7 404 aaPredicted RBP10.44□□□□□ -0.74
CASC3-204ENST00000474190 FAM153AQ9UHL3 310 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 ZFR2Q9UPR6 939 aaKnown RBP10.44□□□□□ -0.74
CASC3-204ENST00000474190 CHKBQ9Y259 395 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 TTLL3Q9Y4R7 772 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 PCDHB9Q9Y5E1 797 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 SPO11Q9Y5K1 396 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 SLCO1B1Q9Y6L6 691 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 GVINP1Q7Z2Y8 2422 aa10.44□□□□□ -0.74
CASC3-204ENST00000474190 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.43□□□□□ -0.74
CASC3-204ENST00000474190 H0Y858 1186 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 KPNA3O00505 521 aaPredicted RBP10.43□□□□□ -0.74
CASC3-204ENST00000474190 RIOK3O14730 519 aaKnown RBP10.43□□□□□ -0.74
CASC3-204ENST00000474190 AXIN1O15169 862 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 LAMTOR5O43504 91 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 PLRG1O43660 514 aaKnown RBP10.43□□□□□ -0.74
CASC3-204ENST00000474190 USP12O75317 370 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 PMPCBO75439 489 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 AP2A1O95782 977 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 EPOP01588 193 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 SERPINF2P08697 491 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 ALPIP09923 528 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 MMP12P39900 470 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 PAFAH1B1P43034 410 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 MAGEA3P43357 314 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 RECQLP46063 649 aaPredicted RBP10.43□□□□□ -0.74
CASC3-204ENST00000474190 ADPRHP54922 357 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 CDK18Q07002 472 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 BCL2L1Q07817 233 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 MPP3Q13368 585 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 ZNF528Q3MIS6 628 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 SYCP2LQ5T4T6 812 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 RNASEH2BQ5TBB1 312 aaKnown RBP10.43□□□□□ -0.74
CASC3-204ENST00000474190 DUPD1Q68J44 220 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 BRAT1Q6PJG6 821 aa10.43□□□□□ -0.74
CASC3-204ENST00000474190 KIAA1324Q6UXG2 1013 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms