RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TM7SF2O76062 418 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 THEGLP0DJG4 465 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 CD59P13987 128 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 MAXP61244 160 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 DYNLT1P63172 113 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 GBE1Q04446 702 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 HNRNPDQ14103 355 aaKnown RBP14.35□□□□□ -0.11
VAMP4-203ENST00000474047 PRAMEF14Q5SWL7 426 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 C11orf63Q6NUN7 778 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 CCDC50Q8IVM0 306 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 NAXDQ8IW45 347 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 ACRBPQ8NEB7 543 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 NUDCD1Q96RS6 583 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 ELF4Q99607 663 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-203ENST00000474047 GOLPH3Q9H4A6 298 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 KNL1Q8NG31 2342 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 FPGTO14772 594 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 AREL1O15033 823 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 MATN3O15232 486 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 ZRANB2O95218 330 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAMP4-203ENST00000474047 ITIH2P19823 946 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 NFKBIAP25963 317 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 VAV2P52735 878 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 CLDN2P57739 230 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 GSDMDP57764 484 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 NXPH1P58417 271 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 IL9RQ01113 521 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 TFDP2Q14188 446 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 ZNF423Q2M1K9 1284 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 INAVAQ3KP66 663 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 PTAR1Q7Z6K3 402 aaPredicted RBP14.34□□□□□ -0.11
VAMP4-203ENST00000474047 OXR1Q8N573 874 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAMP4-203ENST00000474047 TPCN2Q8NHX9 752 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 FAM174AQ8TBP5 190 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 RHBDD1Q8TEB9 315 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 TSGA13Q96PP4 275 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 C1QTNF2Q9BXJ5 285 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 NOD2Q9HC29 1040 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 RBM22Q9NW64 420 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAMP4-203ENST00000474047 PCDHGC4Q9Y5F7 938 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 PCDHGB2Q9Y5G2 931 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 HS3ST3A1Q9Y663 406 aa14.34□□□□□ -0.11
VAMP4-203ENST00000474047 A0A1W2PQ67 120 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 MED19A0JLT2 244 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-203ENST00000474047 TSPAN11A1L157 253 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 C3orf70A6NLC5 250 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-203ENST00000474047 A6NNZ2 444 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 GIPC1O14908 333 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 YKT6O15498 198 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 FLRT2O43155 660 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-203ENST00000474047 PEX11BO96011 259 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 CCNB1P14635 433 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 AP1B1Q10567 949 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 KIF5AQ12840 1032 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 PDK1Q15118 436 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 RALGPS1Q5JS13 557 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 KAZNQ674X7 775 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 MFSD7Q6UXD7 560 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 BZW1Q7L1Q6 419 aaKnown RBP14.33□□□□□ -0.12
VAMP4-203ENST00000474047 CCDC13Q8IYE1 715 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 RCOR2Q8IZ40 523 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 PGBD5Q8N414 524 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 TMEM145Q8NBT3 493 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 KIAA1524Q8TCG1 905 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 LRRN4Q8WUT4 740 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 VOPP1Q96AW1 172 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 SEMA3CQ99985 751 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 MGME1Q9BQP7 344 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 POLR1EQ9GZS1 481 aaKnown RBP14.33□□□□□ -0.12
VAMP4-203ENST00000474047 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 ATP8A1Q9Y2Q0 1164 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 TMEM131Q92545 1883 aa14.33□□□□□ -0.12
VAMP4-203ENST00000474047 A0A1B0GTQ1 180 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 RCCD1A6NED2 376 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
VAMP4-203ENST00000474047 PPP1R12AO14974 1030 aaPredicted RBP14.32□□□□□ -0.12
VAMP4-203ENST00000474047 PRKCGP05129 697 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 ITGAVP06756 1048 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 CES1P23141 567 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 SLC10A2Q12908 348 aaPredicted RBP14.32□□□□□ -0.12
VAMP4-203ENST00000474047 FGL2Q14314 439 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 LLGL1Q15334 1064 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 TMEM52BQ4KMG9 183 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 N4BP2L1Q5TBK1 243 aaPredicted RBP14.32□□□□□ -0.12
VAMP4-203ENST00000474047 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 SPOCD1Q6ZMY3 1216 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 Q6ZSR6 202 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 PIP4P1Q86T03 277 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 DCP2Q8IU60 420 aaKnown RBP14.32□□□□□ -0.12
VAMP4-203ENST00000474047 PLD5Q8N7P1 536 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 ASB12Q8WXK4 309 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 HDAC11Q96DB2 347 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 RBM41Q96IZ5 413 aaKnown RBP14.32□□□□□ -0.12
VAMP4-203ENST00000474047 CAMK1GQ96NX5 476 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 ERVMER34-1Q9H9K5 563 aa14.32□□□□□ -0.12
VAMP4-203ENST00000474047 REXO2Q9Y3B8 237 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms