RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 GSRP00390 522 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-223ENST00000473345 RGRP47804 291 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 THOP1P52888 689 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 ATP11AP98196 1134 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 PPARDQ03181 441 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 SLC20A2Q08357 652 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 CCDC15Q0P6D6 951 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 PAK1Q13153 545 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 INPP5AQ14642 412 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 CYTH1Q15438 398 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 IGFBP7Q16270 282 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 CCDC14Q49A88 953 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 MIIPQ5JXC2 388 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 RETSATQ6NUM9 610 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 GDPD4Q6W3E5 623 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 ZNF574Q6ZN55 896 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-223ENST00000473345 USP53Q70EK8 1073 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 RD3Q7Z3Z2 195 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 TTC7BQ86TV6 843 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 RYBPQ8N488 228 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-223ENST00000473345 GPT2Q8TD30 523 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 SLC20A1Q8WUM9 679 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 BTN2A2Q8WVV5 523 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 CPA5Q8WXQ8 436 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-223ENST00000473345 EXOC2Q96KP1 924 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 LGR4Q9BXB1 951 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 SLC12A9Q9BXP2 914 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 SLC13A1Q9BZW2 595 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 FGF22Q9HCT0 170 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 NCKIPSDQ9NZQ3 722 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 PPARGC1AQ9UBK2 798 aaKnown RBP9.72□□□□□ -0.85
MCF2L-223ENST00000473345 GPR34Q9UPC5 381 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 FHOD1Q9Y613 1164 aa9.72□□□□□ -0.85
MCF2L-223ENST00000473345 SPENQ96T58 3664 aaKnown RBP9.71□□□□□ -0.85
MCF2L-223ENST00000473345 CLEC18AA5D8T8 446 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 NEMP1O14524 444 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 NVLO15381 856 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 TM7SF2O76062 418 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 GNA14O95837 355 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 MMEP08473 750 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 LIPCP11150 499 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 CYP11B1P15538 503 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 CHRNB2P17787 502 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 ADRA1BP35368 520 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 HDAC4P56524 1084 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 SRP54P61011 504 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 YPEL5P62699 121 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 NOMO3P69849 1222 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 B4GALNT1Q00973 533 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 TLE1Q04724 770 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 PTK2Q05397 1052 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 RALGDSQ12967 914 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 STIM1Q13586 685 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 CDO1Q16878 200 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 EXOC3L4Q17RC7 722 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 SKIDA1Q1XH10 827 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 OGFOD3Q6PK18 319 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 ENPP7Q6UWV6 458 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 CLEC18BQ6UXF7 455 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 LRRC31Q6UY01 552 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 GBP6Q6ZN66 633 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 SPRED1Q7Z699 444 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 PTRH1Q86Y79 214 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 CCNJLQ8IV13 435 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 ELOA2Q8IYF1 753 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 CLEC18CQ8NCF0 446 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 RAB7BQ96AH8 199 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 C18orf8Q96DM3 657 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 RBM15Q96T37 977 aaKnown RBP eCLIP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 APOOQ9BUR5 198 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 NAA15Q9BXJ9 866 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 TMEM168Q9H0V1 697 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 EPN3Q9H201 632 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 RDH14Q9HBH5 336 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 METTL5Q9NRN9 209 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 LMBRD1Q9NUN5 540 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 EVA1BQ9NVM1 165 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 TMEM248Q9NWD8 314 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 RRN3Q9NYV6 651 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 OR12D3Q9UGF7 316 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 STAP1Q9ULZ2 295 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 ZFC3H1O60293 1989 aaKnown RBP9.71□□□□□ -0.86
MCF2L-223ENST00000473345 AHCTF1Q8WYP5 2266 aa9.71□□□□□ -0.86
MCF2L-223ENST00000473345 BICDL2A1A5D9 508 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 TSPAN11A1L157 253 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 KDELR3O43731 214 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 POP4O95707 220 aaKnown RBP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 F9P00740 461 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 ITGB2P05107 769 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 PCCBP05166 539 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 RHOQP17081 205 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 KRT9P35527 623 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 SCNN1AP37088 669 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 RPIAP49247 311 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms