RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SEPT6Q14141 434 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 PCSK7Q16549 785 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 TBC1D25Q3MII6 688 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 SPPL2BQ8TCT7 592 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 DQX1Q8TE96 717 aaKnown RBP21.28■■□□□ 1
COL18A1-207ENST00000473212 SH3RF2Q8TEC5 729 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 RTP3Q9BQQ7 232 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 TRPV6Q9H1D0 765 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 CCDC167Q9P0B6 97 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 SUCOQ9UBS9 1254 aaKnown RBP21.28■■□□□ 1
COL18A1-207ENST00000473212 SFMBT1Q9UHJ3 866 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 AP3B1O00203 1094 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 TSPAN8P19075 237 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 SLC5A2P31639 672 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 PSEN2P49810 448 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 CSHL1Q14406 222 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 PIWIL4Q7Z3Z4 852 aaKnown RBP21.28■■□□□ 1
COL18A1-207ENST00000473212 CNTN4Q8IWV2 1026 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 MRPL57Q9BQC6 102 aaKnown RBP21.28■■□□□ 1
COL18A1-207ENST00000473212 CACNA2D2Q9NY47 1150 aa21.28■■□□□ 1
COL18A1-207ENST00000473212 GMPR2Q9P2T1 348 aaKnown RBP21.28■■□□□ 1
COL18A1-207ENST00000473212 FBP2O00757 339 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 C8BP07358 591 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 SCNN1GP51170 649 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 AGKQ53H12 422 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 PM20D1Q6GTS8 502 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 CYP2R1Q6VVX0 501 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 LPGAT1Q92604 370 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 PGAP3Q96FM1 320 aaPredicted RBP21.27■■□□□ 1
COL18A1-207ENST00000473212 SLC39A8Q9C0K1 460 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 CEPT1Q9Y6K0 416 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 TTC24A2A3L6 582 aaPredicted RBP21.27■■□□□ 1
COL18A1-207ENST00000473212 HLA-DQB2P05538 268 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 CTSHP09668 335 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 DNAJB1P25685 340 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 C1QTNF8P60827 252 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 LRP8Q14114 963 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 IKBKEQ14164 716 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 CCL14Q16627 93 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 TIGD5Q53EQ6 642 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 REP15Q6BDI9 236 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 LDB1Q86U70 411 aaPredicted RBP21.27■■□□□ 1
COL18A1-207ENST00000473212 TSPAN14Q8NG11 270 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 OLFM1Q99784 485 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 UNC93B1Q9H1C4 597 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 SPON1Q9HCB6 807 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 MPP6Q9NZW5 540 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 SNX13Q9Y5W8 968 aa21.27■■□□□ 1
COL18A1-207ENST00000473212 ARHGEF37A1IGU5 675 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 PRORSD1PA6NEY8 169 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 F8W810 466 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 ATP5F1P24539 256 aaPredicted RBP21.26■□□□□ 0.99
COL18A1-207ENST00000473212 RHDQ02161 417 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 STX5Q13190 355 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 FASTKQ14296 549 aaKnown RBP21.26■□□□□ 0.99
COL18A1-207ENST00000473212 LAYNQ6UX15 382 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 SLCO4A1Q96BD0 722 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 ZNF597Q96LX8 424 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 ZNF512Q96ME7 567 aaPredicted RBP21.26■□□□□ 0.99
COL18A1-207ENST00000473212 IRAK4Q9NWZ3 460 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 PADI4Q9UM07 663 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 AAR2Q9Y312 384 aaKnown RBP21.26■□□□□ 0.99
COL18A1-207ENST00000473212 CDH2P19022 906 aaPredicted RBP21.26■□□□□ 0.99
COL18A1-207ENST00000473212 EPHX2P34913 555 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 BRCC3P46736 316 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 MTX3Q5HYI7 312 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 CHSY3Q70JA7 882 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 HERC6Q8IVU3 1022 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 MYO1HQ8N1T3 1032 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 ATPAF2Q8N5M1 289 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 GRIN3AQ8TCU5 1115 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 SLC29A1Q99808 456 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 CCT7Q99832 543 aa21.26■□□□□ 0.99
COL18A1-207ENST00000473212 HEATR9A2RTY3 570 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 PSMD12O00232 456 aaPredicted RBP21.25■□□□□ 0.99
COL18A1-207ENST00000473212 TRIM24O15164 1050 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 UBDO15205 165 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 PSMD3O43242 534 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 MAFKO60675 156 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 MOCS2O96007 188 aaPredicted RBP21.25■□□□□ 0.99
COL18A1-207ENST00000473212 CDK4P11802 303 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 DNAJB2P25686 324 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 PSMD8P48556 350 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 HPCAP84074 193 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 BORAQ6PGQ7 559 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 TRIML2Q8N7C3 387 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 PPHLN1Q8NEY8 458 aaKnown RBP21.25■□□□□ 0.99
COL18A1-207ENST00000473212 GLOD4Q9HC38 313 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 GALNT8Q9NY28 637 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 hCG_2014768A0A024R1R8 64 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 CD151P48509 253 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 CRYBB1P53674 252 aaPredicted RBP21.25■□□□□ 0.99
COL18A1-207ENST00000473212 SLC12A2P55011 1212 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 DNAJB13P59910 316 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 CDC42EP1Q00587 391 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 LRRTM3Q86VH5 581 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 TMIGD2Q96BF3 282 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 PHF21BQ96EK2 531 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 CIB1Q99828 191 aa21.25■□□□□ 0.99
COL18A1-207ENST00000473212 IGSF5Q9NSI5 407 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms