RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ZBTB8BQ8NAP8 495 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CCDC150Q8NCX0 1101 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CTCFLQ8NI51 663 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 C9orf43Q8TAL5 461 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CPT1CQ8TCG5 803 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ARHGEF2Q92974 986 aaKnown RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SKA1Q96BD8 255 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SDCCAG3Q96C92 435 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 NRBF2Q96F24 287 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 MAP6Q96JE9 813 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SLC12A9Q9BXP2 914 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 MMADHCQ9H3L0 296 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SYNCQ9H7C4 482 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ZSWIM4Q9H7M6 989 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TMEM206Q9H813 350 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 PLEKHA5Q9HAU0 1116 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ZBTB40Q9NUA8 1239 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 AP5S1Q9NUS5 200 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 PIH1D1Q9NWS0 290 aaKnown RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SMPD4Q9NXE4 827 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 KCTD5Q9NXV2 234 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SIRPGQ9P1W8 387 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CGGBP1Q9UFW8 167 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TUBGCP4Q9UGJ1 667 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 GTF2A1LQ9UNN4 478 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CARD8Q9Y2G2 431 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 DAAM1Q9Y4D1 1078 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 PCDHGA8Q9Y5G5 932 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TTC41PQ6P2S7 1318 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 STK36Q9NRP7 1315 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 A0A087WWV3 80 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 LY6G6EA0A0G2JKS1 128 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 IQANK1A0A1B0GTG1 560 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 A0A1W2PQJ5 194 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TMEM82A0PJX8 343 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 GOLGA6L4A6NEF3 574 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 GOLGA6L9A6NEM1 432 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 LRRIQ4A6NIV6 560 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 OR6C75A6NL08 312 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 M0QZQ0 153 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 PPEF2O14830 753 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 LSM1O15116 133 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 FFAR2O15552 330 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ASAP2O43150 1006 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 KLF4O43474 513 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 SLC26A4O43511 780 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 SUSD5O60279 629 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TSPAN3O60637 253 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ZNF254O75437 659 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 KCNH1O95259 989 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 FGFR1OPO95684 399 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 IGLV3-19P01714 112 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 IGHV4-34P06331 123 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 HAPLN1P10915 354 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TNNT1P13805 278 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 CD27P26842 260 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ARL2P36404 184 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 CCT6AP40227 531 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ARL4AP40617 200 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 UBA7P41226 1012 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 PDX1P52945 283 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 GEMIN4P57678 1058 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 PSMC5P62195 406 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ASIC1P78348 528 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 AMPD3Q01432 767 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 GRIN1Q05586 938 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 SPAG1Q07617 926 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 LAPTM5Q13571 262 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 DPYSQ14117 519 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TFDP1Q14186 410 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 MXD4Q14582 209 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ZRSR1Q15695 479 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 CCDC142Q17RM4 750 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 C15orf59Q2T9L4 293 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 SKOR2Q2VWA4 1001 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 PRR30Q53SZ7 412 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 XKR9Q5GH70 373 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ZC3H12BQ5HYM0 836 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 MANEAQ5SRI9 462 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TEX35Q5T0J7 233 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 NDUFAF5Q5TEU4 345 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 PPP4R3AQ6IN85 833 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 GALNT18Q6P9A2 607 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ALKAL1Q6UXT8 129 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 CLEC17AQ6ZS10 378 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 MAEAQ7L5Y9 396 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TIPARPQ7Z3E1 657 aaKnown RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TMPRSS9Q7Z410 1059 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 BRAPQ7Z569 592 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 C14orf80Q86SX3 495 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 HEATR4Q86WZ0 1026 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 ZFAND4Q86XD8 727 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 PRIMA1Q86XR5 153 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 TMPRSS6Q8IU80 811 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 SLC25A45Q8N413 288 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 GPT2Q8TD30 523 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 IGDCC4Q8TDY8 1250 aa4.53□□□□□ -1.68
LMNB1-205ENST00000472034 JPH3Q8WXH2 748 aaPredicted RBP4.53□□□□□ -1.68
LMNB1-205ENST00000472034 WBP2Q969T9 261 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms