RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 MRM3Q9HC36 420 aaKnown RBP17.54■□□□□ 0.4
RRP1-202ENST00000471909 TREX1Q9NSU2 369 aa17.54■□□□□ 0.4
RRP1-202ENST00000471909 RPL17P18621 184 aaKnown RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 KCNQ1P51787 676 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 ITKQ08881 620 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 CTBP1Q13363 440 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 ZNF354CQ86Y25 554 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 WDR75Q8IWA0 830 aaKnown RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 SLC26A7Q8TE54 656 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 DEFB118Q96PH6 123 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 SIKE1Q9BRV8 207 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 ATP13A1Q9HD20 1204 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 DNAJC16Q9Y2G8 782 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 TTC24A2A3L6 582 aaPredicted RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 MMP2P08253 660 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 RALBP11234 206 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 GRK2P25098 689 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 CD86P42081 329 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 APLP1P51693 650 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 MPP1Q00013 466 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 ITGA9Q13797 1035 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 POLD3Q15054 466 aaPredicted RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 LRRC23Q53EV4 343 aaPredicted RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 LRRC43Q8N309 656 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 TEX26Q8N6G2 289 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 SHKBP1Q8TBC3 707 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 PIWIL2Q8TC59 973 aaKnown RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 SORT1Q99523 831 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 TTLL2Q9BWV7 592 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 UBE2OQ9C0C9 1292 aaKnown RBP17.53■□□□□ 0.4
RRP1-202ENST00000471909 KLHL4Q9C0H6 718 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 HIPK3Q9H422 1215 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 ARNT2Q9HBZ2 717 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 TBC1D30Q9Y2I9 924 aa17.53■□□□□ 0.4
RRP1-202ENST00000471909 DOCK4Q8N1I0 1966 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 G3V2L1 256 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 RAMP2O60895 175 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 CXCL10P02778 98 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 UQCRBP14927 111 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 SAT1P21673 171 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 HADHAP40939 763 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 ATN1P54259 1190 aaPredicted RBP17.52■□□□□ 0.4
RRP1-202ENST00000471909 SH3BGRP55822 239 aaPredicted RBP17.52■□□□□ 0.4
RRP1-202ENST00000471909 DSC2Q02487 901 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 SEPT6Q14141 434 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 SFT2D3Q587I9 215 aa17.52■□□□□ 0.4
RRP1-202ENST00000471909 OXCT2Q9BYC2 517 aaPredicted RBP17.52■□□□□ 0.4
RRP1-202ENST00000471909 PAK6Q9NQU5 681 aaPredicted RBP17.52■□□□□ 0.4
RRP1-202ENST00000471909 EFEMP2O95967 443 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 PABPC4LP0CB38 370 aaKnown RBP17.52■□□□□ 0.39
RRP1-202ENST00000471909 ETS2P15036 469 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 OR1E1P30953 314 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 ACVRL1P37023 503 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 COPAP53621 1224 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 EPHB1P54762 984 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 USP10Q14694 798 aaKnown RBP17.52■□□□□ 0.39
RRP1-202ENST00000471909 LPCAT4Q643R3 524 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 SLC8B1Q6J4K2 584 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 DEFB128Q7Z7B8 93 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 PGBD5Q8N414 524 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 VN1R3Q9BXE9 311 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 NMRAL1Q9HBL8 299 aa17.52■□□□□ 0.39
RRP1-202ENST00000471909 PHGDHO43175 533 aaKnown RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 CCNT2O60583 730 aaKnown RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 KLHL2O95198 593 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 TACR2P21452 398 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 OR1D2P34982 312 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 ALDH7A1P49419 539 aaKnown RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 NUMBP49757 651 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 XIAPP98170 497 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 SERINC3Q13530 473 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 SCN5AQ14524 2016 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 PARP15Q460N3 678 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 GREB1Q4ZG55 1949 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 FNDC1Q4ZHG4 1894 aaPredicted RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
RRP1-202ENST00000471909 MFSD6LQ8IWD5 586 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 POU5F2Q8N7G0 328 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 JADE3Q92613 823 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 C1QTNF1Q9BXJ1 281 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 VPS45Q9NRW7 570 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 MTRRQ9UBK8 725 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 APOBEC2Q9Y235 224 aaKnown RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 SIN3BO75182 1162 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 ETFBP38117 255 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 SLC1A2P43004 574 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 TNK2Q07912 1038 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 IL10RBQ08334 325 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 MSLNQ13421 630 aaPredicted RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 LSAMPQ13449 338 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 UGP2Q16851 508 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 RALGPS1Q5JS13 557 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 KIAA0930Q6ICG6 404 aaPredicted RBP17.51■□□□□ 0.39
RRP1-202ENST00000471909 SLC41A1Q8IVJ1 513 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 ARRDC2Q8TBH0 407 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 NAT14Q8WUY8 206 aa17.51■□□□□ 0.39
RRP1-202ENST00000471909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.5■□□□□ 0.39
RRP1-202ENST00000471909 SLC35E2BP0CK96 405 aa17.5■□□□□ 0.39
RRP1-202ENST00000471909 PAMP19021 973 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms