RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 INTS9Q9NV88 658 aaKnown RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 DUS2Q9NX74 493 aaKnown RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 NKIRAS1Q9NYS0 192 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 LMCD1Q9NZU5 365 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.46□□□□□ -0.9
VPS52-216ENST00000471309 SLC17A6Q9P2U8 582 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 SLC25A13Q9UJS0 675 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 CDH7Q9ULB5 785 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 RAI2Q9Y5P3 530 aa9.46□□□□□ -0.9
VPS52-216ENST00000471309 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 HMX2A2RU54 273 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 K7ERQ8 282 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SLC7A4O43246 635 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SMAD6O43541 496 aaKnown RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 TIMM44O43615 452 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 FZD6O60353 706 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SOCS5O75159 536 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 RFPL1O75677 317 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ZWINTO95229 277 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 VAPBO95292 243 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 NFATC1O95644 943 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 GSRP00390 522 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 PRLP01236 227 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ITGA2BP08514 1039 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ADH5P11766 374 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SRCP12931 536 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 FCARP24071 287 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 VIPR2P41587 438 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 GRIA4P48058 902 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ARCN1P48444 511 aaKnown RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 RPL26P61254 145 aaKnown RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 SLC18A2Q05940 514 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ADAM15Q13444 863 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 BMPR2Q13873 1038 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 MPP2Q14168 576 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 PDGFRLQ15198 375 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 DHCR24Q15392 516 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 UGP2Q16851 508 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 HSP90AA5PQ58FG0 334 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ATXN7L2Q5T6C5 722 aaPredicted RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 TEDDM1Q5T9Z0 273 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ESRP1Q6NXG1 681 aaKnown RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 C22orf39Q6P5X5 142 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SH2D5Q6ZV89 423 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 STRA8Q7Z7C7 330 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ADIPOR2Q86V24 386 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 LMNTD2Q8IXW0 634 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 LPCAT1Q8NF37 534 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 OR2AP1Q8NGE2 309 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 OR13J1Q8NGT2 312 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 GABPB2Q8TAK5 448 aaPredicted RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 BRSK1Q8TDC3 778 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ACMSDQ8TDX5 336 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 DENND1AQ8TEH3 1009 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 WFIKKN2Q8TEU8 576 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ATP2A3Q93084 1043 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 ISL2Q96A47 359 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 PRO3102Q9H379 93 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 IARS2Q9NSE4 1012 aaKnown RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS52-216ENST00000471309 IL1RAPL1Q9NZN1 696 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 HACD3Q9P035 362 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 SLC2A6Q9UGQ3 507 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 GGT7Q9UJ14 662 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 FBXO10Q9UK96 956 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 RPL26L1Q9UNX3 145 aaKnown RBP9.45□□□□□ -0.9
VPS52-216ENST00000471309 CHKBQ9Y259 395 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 PSAT1Q9Y617 370 aa9.45□□□□□ -0.9
VPS52-216ENST00000471309 CCDC78A2IDD5 438 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 HEPACAM2A8MVW5 462 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 TM9SF1O15321 606 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 SPAG7O75391 227 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 ZNF821O75541 412 aaPredicted RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 CRTAMO95727 393 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 PSMA3P25788 255 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 SPRP35270 261 aaPredicted RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 CTSOP43234 321 aaPredicted RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 MAGEA12P43365 314 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 STK19P49842 368 aaPredicted RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 NEK3P51956 506 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 SNRPD1P62314 119 aaKnown RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 ECT2LQ008S8 904 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 FCHO2Q0JRZ9 810 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 THOC5Q13769 683 aaKnown RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 SMAD1Q15797 465 aaKnown RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 CNGA3Q16281 694 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 MROH9Q5TGP6 573 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 TTC19Q6DKK2 380 aaPredicted RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 KIAA0408Q6ZU52 694 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 GALNT7Q86SF2 657 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 ETFBKMTQ8IXQ9 262 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 ANKRD42Q8N9B4 389 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 CALML6Q8TD86 181 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 BLOC1S5Q8TDH9 187 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 RMDN1Q96DB5 314 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms