RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZBED6P86452 979 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 E2F1Q01094 437 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-211ENST00000471260 NSUN2Q08J23 767 aaKnown RBP eCLIP13.65□□□□□ -0.22
HMGN1-211ENST00000471260 DNAJC3Q13217 504 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CAMK2BQ13554 666 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 BOLA3Q53S33 107 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CCDC157Q569K6 752 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 AFMIDQ63HM1 303 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 BRAT1Q6PJG6 821 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 PARGQ86W56 976 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CXorf40AQ8TE69 158 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CENPTQ96BT3 561 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 PEBP4Q96S96 227 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 ZWILCHQ9H900 591 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 USP29Q9HBJ7 922 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-211ENST00000471260 GPATCH2LQ9NWQ4 482 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 IPO11Q9UI26 975 aaKnown RBP13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CSNK1G3Q9Y6M4 447 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 TSPAN11A1L157 253 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TRABD2BA6NFA1 517 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TAF4O00268 1085 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TRIM38O00635 465 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 SCAMP1O15126 338 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 RAD51BO15315 384 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 SPINT1O43278 529 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 SIGLEC6O43699 453 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 SERPING1P05155 500 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 NME1P15531 152 aaKnown RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TIMP2P16035 220 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 XPAP23025 273 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 IL10RBQ08334 325 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 PTK2BQ14289 1009 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 FZD2Q14332 565 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 PIGHQ14442 188 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 CA9Q16790 459 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TMEM52BQ4KMG9 183 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TDRD12Q587J7 1177 aaKnown RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 HGSNATQ68CP4 663 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 SYT10Q6XYQ8 523 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 CYP4V2Q6ZWL3 525 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TC2NQ8N9U0 490 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 FAM181AQ8N9Y4 354 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 BTN2A2Q8WVV5 523 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 RFFLQ8WZ73 363 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 KCTD15Q96SI1 283 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-211ENST00000471260 TRIM7Q9C029 511 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 SUV39H2Q9H5I1 410 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 DNAJC28Q9NX36 388 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 PPP2R2CQ9Y2T4 447 aa13.64□□□□□ -0.23
HMGN1-211ENST00000471260 CFAP69A5D8W1 941 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 J3KR12 359 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 PALMO75781 387 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 ARL4AP40617 200 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 DUSP3P51452 185 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 DAB2P98082 770 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 PDE1CQ14123 709 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 DPYSL2Q16555 572 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 UGP2Q16851 508 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 PPP6R3Q5H9R7 873 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 TMCO4Q5TGY1 634 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 ERAP2Q6P179 960 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 ARHGAP12Q8IWW6 846 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 REXO1L1PQ8IX06 675 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 NIPA2Q8N8Q9 360 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 CELF6Q96J87 481 aaKnown RBP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 TBATAQ96M53 351 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 SP110Q9HB58 689 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 UCKL1Q9NWZ5 548 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 NCKIPSDQ9NZQ3 722 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 MYO1AQ9UBC5 1043 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 GGT7Q9UJ14 662 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 ITM2BQ9Y287 266 aa13.63□□□□□ -0.23
HMGN1-211ENST00000471260 LUC7L2Q9Y383 392 aaKnown RBP13.63□□□□□ -0.23
HMGN1-211ENST00000471260 AKAP13Q12802 2813 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 H3BRJ5 948 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 TPP1O14773 563 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 INSIG1O15503 277 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 MMP20O60882 483 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 GP1BAP07359 652 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 CCDC175P0C221 793 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 GIMD1P0DJR0 217 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 CKMT1AP12532 417 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 H2AFXP16104 143 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-211ENST00000471260 SERPINA4P29622 427 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 PEX5P50542 639 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 RENBPP51606 427 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms