RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 CASS4Q9NQ75 786 aa11.72□□□□□ -0.53
FN1-217ENST00000471193 RAB21Q9UL25 225 aa11.72□□□□□ -0.53
FN1-217ENST00000471193 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
FN1-217ENST00000471193 F5P12259 2224 aa11.72□□□□□ -0.53
FN1-217ENST00000471193 A0A1W2PQ67 120 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 FAM170BA6NMN3 283 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 C1QTNF3-AMACRE9PGA6 284 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 GOLGA8MH3BSY2 632 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 SYNCRIPO60506 623 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 PPFIA2O75334 1257 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 CPP00450 1065 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 AGTP01019 485 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 FGF1P05230 155 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PDHA1P08559 390 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 MYBL2P10244 700 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 C7P10643 843 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 MLNP12872 115 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 MAGEA3P43357 314 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 CHRNA4P43681 627 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 GRIA4P48058 902 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 RPL26P61254 145 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 SARNPP82979 210 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 CDH17Q12864 832 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 GAS6Q14393 721 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 GALNT3Q14435 633 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.53
FN1-217ENST00000471193 SLC1A5Q15758 541 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 ARSIQ5FYB1 569 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 SIRPB2Q5JXA9 342 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 ARMC12Q5T9G4 340 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 CWF19L1Q69YN2 538 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 LRRC8BQ6P9F7 803 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 CAND1Q86VP6 1230 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 ZSWIM9Q86XI8 627 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 GSPT2Q8IYD1 628 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 LPCAT1Q8NF37 534 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 OR52K1Q8NGK4 314 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 OR2T3Q8NH03 318 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PDCD6IPQ8WUM4 868 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PWWP2AQ96N64 755 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 FMO2Q99518 471 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 APOL2Q9BQE5 337 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PARD6BQ9BYG5 372 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 CHRDQ9H2X0 955 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 SUV39H2Q9H5I1 410 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 DKK3Q9UBP4 350 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 SARDHQ9UL12 918 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 NFU1Q9UMS0 254 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 RPL26L1Q9UNX3 145 aaKnown RBP11.71□□□□□ -0.53
FN1-217ENST00000471193 CHKBQ9Y259 395 aa11.71□□□□□ -0.53
FN1-217ENST00000471193 AP3B1O00203 1094 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 TUBBP07437 444 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 MCM3P25205 808 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ITGB7P26010 798 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
FN1-217ENST00000471193 RPS9P46781 194 aaKnown RBP11.7□□□□□ -0.54
FN1-217ENST00000471193 PSMD8P48556 350 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ARL4CP56559 192 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 SATB1Q01826 763 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 CBLBQ13191 982 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 HIF1AQ16665 826 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 QPCTQ16769 361 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ZNF805Q5CZA5 627 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ZNF776Q68DI1 518 aaPredicted RBP11.7□□□□□ -0.54
FN1-217ENST00000471193 BRAT1Q6PJG6 821 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 TRIM67Q6ZTA4 783 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 PARS2Q7L3T8 475 aaKnown RBP11.7□□□□□ -0.54
FN1-217ENST00000471193 SYT13Q7L8C5 426 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 KDELC2Q7Z4H8 507 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 MMAAQ8IVH4 418 aaKnown RBP11.7□□□□□ -0.54
FN1-217ENST00000471193 SLC25A41Q8N5S1 370 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 HCAR2Q8TDS4 363 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 PIH1D2Q8WWB5 315 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.7□□□□□ -0.54
FN1-217ENST00000471193 ARRDC3Q96B67 414 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ERLEC1Q96DZ1 483 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 PPP1R16AQ96I34 528 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 KLHL32Q96NJ5 620 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ADGRE3Q9BY15 652 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 MTRF1LQ9UGC7 380 aaKnown RBP11.7□□□□□ -0.54
FN1-217ENST00000471193 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 ANKRD36A6QL64 1941 aa11.7□□□□□ -0.54
FN1-217ENST00000471193 MYO18AQ92614 2054 aaKnown RBP11.69□□□□□ -0.54
FN1-217ENST00000471193 E7ESA3 106 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 KPNA3O00505 521 aaPredicted RBP11.69□□□□□ -0.54
FN1-217ENST00000471193 EIF3HO15372 352 aaKnown RBP eCLIP11.69□□□□□ -0.54
FN1-217ENST00000471193 RNASEH1O60930 286 aaKnown RBP11.69□□□□□ -0.54
FN1-217ENST00000471193 ATG13O75143 517 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 AVILO75366 819 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 ADH1BP00325 375 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 IL1BP01584 269 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 ALADP13716 330 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 METAP1P53582 386 aa11.69□□□□□ -0.54
FN1-217ENST00000471193 RPS14P62263 151 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms