RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 WRAP53Q9BUR4 548 aaKnown RBP17.67■□□□□ 0.42
COL7A1-208ENST00000470076 BOCQ9BWV1 1114 aa17.67■□□□□ 0.42
COL7A1-208ENST00000470076 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
COL7A1-208ENST00000470076 POLR1BQ9H9Y6 1135 aa17.67■□□□□ 0.42
COL7A1-208ENST00000470076 MBNL1Q9NR56 388 aaKnown RBP17.67■□□□□ 0.42
COL7A1-208ENST00000470076 MYO6Q9UM54 1294 aa17.67■□□□□ 0.42
COL7A1-208ENST00000470076 LRRK1Q38SD2 2015 aa17.67■□□□□ 0.42
COL7A1-208ENST00000470076 MGAQ8IWI9 3026 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 TSPAN11A1L157 253 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 GOLGA6L22H0YM25 854 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 INSIG1O15503 277 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 GCATO75600 419 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 ANXA6P08133 673 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 ITIH2P19823 946 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 TGM2P21980 687 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 PEX5P50542 639 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 BLKP51451 505 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 ADKP55263 362 aaKnown RBP17.66■□□□□ 0.42
COL7A1-208ENST00000470076 ERVPABLB-1P60509 514 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 OGDHQ02218 1023 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 PPARDQ03181 441 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 TLE3Q04726 772 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 UGP2Q16851 508 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 ISXQ2M1V0 245 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 C6orf132Q5T0Z8 1188 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 FAXCQ5TGI0 409 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 IRF2BP2Q7Z5L9 587 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 SPACA3Q8IXA5 215 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 NAT6Q93015 286 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 ZNF641Q96N77 438 aaPredicted RBP17.66■□□□□ 0.42
COL7A1-208ENST00000470076 LGMNQ99538 433 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 LRRC61Q9BV99 259 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 HSD3B7Q9H2F3 369 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 TCEAL2Q9H3H9 227 aaPredicted RBP17.66■□□□□ 0.42
COL7A1-208ENST00000470076 SUV39H2Q9H5I1 410 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 PDFQ9HBH1 243 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 PARVAQ9NVD7 372 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 RAI2Q9Y5P3 530 aa17.66■□□□□ 0.42
COL7A1-208ENST00000470076 TMEM110-MUSTN1A8MSY1 372 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 TK2O00142 265 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 PRAMEF11O60813 436 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 PIGNO95427 931 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 TNFAIP3P21580 790 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 MAMLD1Q13495 774 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 C1orf61Q13536 156 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 LRRC14Q15048 493 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 IRF4Q15306 451 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 CFAP58Q5T655 872 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 ERAP2Q6P179 960 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 BRAT1Q6PJG6 821 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 SLC35F3Q8IY50 421 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 FSTL5Q8N475 847 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-208ENST00000470076 WDR48Q8TAF3 677 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 HIC2Q96JB3 615 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 TUBGCP5Q96RT8 1024 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 PNMA8BQ9ULN7 279 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-208ENST00000470076 AP4E1Q9UPM8 1137 aa17.65■□□□□ 0.42
COL7A1-208ENST00000470076 COL27A1Q8IZC6 1860 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-208ENST00000470076 ARHGAP42A6NI28 874 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 J3KR12 359 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 EEF2KO00418 725 aaKnown RBP17.64■□□□□ 0.41
COL7A1-208ENST00000470076 MUSKO15146 869 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 YY2O15391 372 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 TCEA3O75764 348 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 ATP1A3P13637 1013 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 TSHRP16473 764 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 PSMA2P25787 234 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 CSNK1DP48730 415 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 AGERQ15109 404 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 ESRP1Q6NXG1 681 aaKnown RBP17.64■□□□□ 0.41
COL7A1-208ENST00000470076 IGF2-ASQ6U949 168 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 RBM44Q6ZP01 1051 aaKnown RBP17.64■□□□□ 0.41
COL7A1-208ENST00000470076 GPR155Q7Z3F1 870 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 LSM14AQ8ND56 463 aaKnown RBP17.64■□□□□ 0.41
COL7A1-208ENST00000470076 CLPBQ9H078 707 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 DHX35Q9H5Z1 703 aaKnown RBP17.64■□□□□ 0.41
COL7A1-208ENST00000470076 PCDH12Q9NPG4 1184 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 THSD1Q9NS62 852 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 GPATCH2LQ9NWQ4 482 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 TAS2R14Q9NYV8 317 aa17.64■□□□□ 0.41
COL7A1-208ENST00000470076 HELZ2Q9BYK8 2649 aaKnown RBP17.64■□□□□ 0.41
COL7A1-208ENST00000470076 ANKRD36A6QL64 1941 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 TEX51A0A1B0GUA7 166 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 ATXN7O15265 892 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-208ENST00000470076 MBD3O95983 291 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 ALPIP09923 528 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 C6P13671 934 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 HTR1BP28222 390 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 PAPOLAP51003 745 aaKnown RBP17.63■□□□□ 0.41
COL7A1-208ENST00000470076 HK3P52790 923 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 ELOCQ15369 112 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 WSCD2Q2TBF2 565 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 PERM1Q5SV97 790 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 CCDC183Q5T5S1 534 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 ERMARDQ5T6L9 678 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 LVRNQ6Q4G3 990 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 SDR16C5Q8N3Y7 309 aa17.63■□□□□ 0.41
COL7A1-208ENST00000470076 AOPEPQ8N6M6 819 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms