RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 CPNE1Q99829 537 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 WDR18Q9BV38 432 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 TEKT3Q9BXF9 490 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 DSN1Q9H410 356 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 EHMT1Q9H9B1 1298 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 SYTL2Q9HCH5 934 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 SNX15Q9NRS6 342 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 WRAP73Q9P2S5 460 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 NUP50Q9UKX7 468 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 TBX20Q9UMR3 447 aa9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 SCAF8Q9UPN6 1271 aaKnown RBP9.1□□□□□ -0.95
SMARCE1-207ENST00000469334 TTC24A2A3L6 582 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 MRASO14807 208 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 NDUFS2O75306 463 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 BBOX1O75936 387 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ENDOD1O94919 500 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 MFN2O95140 757 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 PIGNO95427 931 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 CLIC3O95833 236 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 JUNP05412 331 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 UMPSP11172 480 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 HSD17B1P14061 328 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ENPP1P22413 925 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 IL1R2P27930 398 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 RFC2P35250 354 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ZNF132P52740 706 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 DEFA1P59665 94 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 DEFA3P59666 94 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 EPS8Q12929 822 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 TARDBPQ13148 414 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 SEMA5AQ13591 1074 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ACOX1Q15067 660 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 STILQ15468 1287 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 TYSND1Q2T9J0 566 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 SMTNL2Q2TAL5 461 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 BRMS1LQ5PSV4 323 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 NDUFAF5Q5TEU4 345 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 TAF2Q6P1X5 1199 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 B3GNT9Q6UX72 402 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 CATSPER4Q7RTX7 472 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 THAP5Q7Z6K1 395 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 SNX29P2Q8IUI4 249 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 CDKL3Q8IVW4 592 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 TBC1D21Q8IYX1 336 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 PAPD5Q8NDF8 572 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 PSMA8Q8TAA3 256 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 DYNC2LI1Q8TCX1 351 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ZNF606Q8WXB4 792 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 TMEM246Q9BRR3 403 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ZNF577Q9BSK1 485 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 CENPOQ9BU64 300 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 GON7Q9BXV9 100 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 RHOBTB2Q9BYZ6 727 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 POLE4Q9NR33 117 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 FBXO28Q9NVF7 368 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ACTR3BQ9P1U1 418 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ARHGAP28Q9P2N2 729 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ZMAT5Q9UDW3 170 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 ANAPC2Q9UJX6 822 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 KIAA1257Q9ULG3 409 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 GRIP1Q9Y3R0 1128 aa9.09□□□□□ -0.95
SMARCE1-207ENST00000469334 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF99A8MXY4 864 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CABYRO75952 493 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SNRPB2P08579 225 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 NAT2P11245 290 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 DDX5P17844 614 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 PGAM1P18669 254 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 TFE3P19532 575 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 DNAJB1P25685 340 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 AXLP30530 894 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 PRIM2P49643 509 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ATP4BP51164 291 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF135P52742 658 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 EIF6P56537 245 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SIK1P57059 783 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 BNC1Q01954 994 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC13A2Q13183 592 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 TREML2Q5T2D2 321 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CYP4A22Q5TCH4 519 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 TMEM198Q66K66 360 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CHST15Q7LFX5 561 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 UBE2Q1Q7Z7E8 422 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 RIOX2Q8IUF8 465 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CCDC103Q8IW40 242 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CMTR2Q8IYT2 770 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ADGRG5Q8IZF4 528 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 C8orf59Q8N0T1 100 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 FLAD1Q8NFF5 587 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ADAM32Q8TC27 787 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 URGCPQ8TCY9 931 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 PROX1Q92786 737 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms