RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 IGSF6O95976 241 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 RHOP08100 348 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 COL6A2P12110 1019 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 OGNP20774 298 aaKnown RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ALDH3A1P30838 453 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SLC1A2P43004 574 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ARCN1P48444 511 aaKnown RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 CSNK1DP48730 415 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SCNN1BP51168 640 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SLC12A2P55011 1212 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ERVK-21P61565 698 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ACVR1Q04771 509 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SLC20A2Q08357 652 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 GPM6BQ13491 265 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 GALNT3Q14435 633 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 CYTH1Q15438 398 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SHHQ15465 462 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 TSNAXIP1Q2TAA8 658 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 LRIT3Q3SXY7 679 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 C9orf50Q5SZB4 431 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 FSTL4Q6MZW2 842 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 NEPROQ6NW34 567 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ESRP1Q6NXG1 681 aaKnown RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 FAM47EQ6ZV65 393 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 KDELC2Q7Z4H8 507 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ZC3HC1Q86WB0 502 aaKnown RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 KIAA1958Q8N8K9 716 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 GBP7Q8N8V2 638 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ARMC2Q8NEN0 867 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 FIBINQ8TAL6 211 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 RDH11Q8TC12 318 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 BRSK1Q8TDC3 778 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 BLOC1S5Q8TDH9 187 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SH3RF2Q8TEC5 729 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 STYXQ8WUJ0 223 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 RMDN1Q96DB5 314 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 TRIB3Q96RU7 358 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 AGAP2Q99490 1192 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 FEM1AQ9BSK4 669 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 MCMBPQ9BTE3 642 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 TSSK1BQ9BXA7 367 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SLC46A2Q9BY10 475 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 NOD2Q9HC29 1040 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 TDP1Q9NUW8 608 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 IL1RAPL1Q9NZN1 696 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 LHX3Q9UBR4 397 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 TLK1Q9UKI8 766 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 MYOFQ9NZM1 2061 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 A0A087X1B8 175 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 A0A096LPK6 155 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 FAM95CA0A1B0GW59 222 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 CCDC78A2IDD5 438 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 C2orf81A6NN90 581 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 PFDN6O15212 129 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 GRM6O15303 877 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 PLIN3O60664 434 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 H2AFYO75367 372 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 CSPG5O95196 566 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 BPGMP07738 259 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 EPCAMP16422 314 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 STMN1P16949 149 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 GLDCP23378 1020 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 ARNTP27540 789 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 MZF1P28698 734 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 CRABP2P29373 138 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 GRIA4P48058 902 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 LEPRP48357 1165 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 PLK1P53350 603 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 RPL26P61254 145 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 TMPRSS15P98073 1019 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 POU4F1Q01851 419 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SULT2A1Q06520 285 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 DMC1Q14565 340 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 GRM3Q14832 879 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 TEAD2Q15562 447 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 TAF1AQ15573 450 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SMAD1Q15797 465 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 CNGA3Q16281 694 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 PLEKHG6Q3KR16 790 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 N4BP2L1Q5TBK1 243 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 MRNIPQ6NTE8 343 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 NCEH1Q6PIU2 408 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 AFTPHQ6ULP2 937 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 RAPH1Q70E73 1250 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 GLT6D1Q7Z4J2 308 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 CLEC14AQ86T13 490 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SRLQ86TD4 932 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 NUDCD3Q8IVD9 361 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 TTC16Q8NEE8 873 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 LPCAT1Q8NF37 534 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 PPP1R14CQ8TAE6 165 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 E2F7Q96AV8 911 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 MYO19Q96H55 970 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 ZNF778Q96MU6 729 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 C7orf26Q96N11 449 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SIKE1Q9BRV8 207 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms