RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CDH22Q9UJ99 828 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 SLC25A13Q9UJS0 675 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 HMX2A2RU54 273 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 ITGA2BP08514 1039 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 PIRTP0C851 137 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 SPRP35270 261 aaPredicted RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 ARCN1P48444 511 aaKnown RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 PDE1BQ01064 536 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 SLC18A2Q05940 514 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 TRAF2Q12933 501 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 DNAJC3Q13217 504 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 DMC1Q14565 340 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 SEPT7Q16181 437 aaKnown RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 SYCE2Q6PIF2 218 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 BRSK1Q8TDC3 778 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 RBBP8Q99708 897 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 PAIP2Q9BPZ3 127 aaKnown RBP19.11■□□□□ 0.65
SMC4-209ENST00000468653 SLC2A11Q9BYW1 496 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 C2orf16Q68DN1 1984 aa19.11■□□□□ 0.65
SMC4-209ENST00000468653 RFPL1O75677 317 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 IGSF6O95976 241 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 ADH1CP00326 375 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 PRLP01236 227 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 PRKCGP05129 697 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 PDHA1P08559 390 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 ADH5P11766 374 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 ARNTP27540 789 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 STK19P49842 368 aaPredicted RBP19.1■□□□□ 0.65
SMC4-209ENST00000468653 SULT2A1Q06520 285 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 TRIM68Q6AZZ1 485 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 TIFABQ6ZNK6 161 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 TNS4Q8IZW8 715 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 GDAP1Q8TB36 358 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 PTPRN2Q92932 1015 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 APOPT1Q96IL0 206 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 FAM167BQ9BTA0 163 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 EPN3Q9H201 632 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 TNKS2Q9H2K2 1166 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 NUP210Q8TEM1 1887 aaPredicted RBP19.1■□□□□ 0.65
SMC4-209ENST00000468653 MYLKQ15746 1914 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 TRANK1O15050 2925 aa19.1■□□□□ 0.65
SMC4-209ENST00000468653 LDB2O43679 373 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 ZWINTO95229 277 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 CRTAMO95727 393 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 CYP17A1P05093 508 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 SRCP12931 536 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 MAPK8P45983 427 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 CSNK1DP48730 415 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 CSE1LP55060 971 aaKnown RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 EML3Q32P44 896 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 SH2D5Q6ZV89 423 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 RYBPQ8N488 228 aaPredicted RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 OR6K2Q8NGY2 324 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 GABPB2Q8TAK5 448 aaPredicted RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 DENND1AQ8TEH3 1009 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 ATP2A3Q93084 1043 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 EVLQ9UI08 416 aaPredicted RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 HS3ST2Q9Y278 367 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 KCTD3Q9Y597 815 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 ARL5AQ9Y689 179 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 GMNCA6NCL1 334 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 SRRM3A6NNA2 597 aaPredicted RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 HEPACAM2A8MVW5 462 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 COPEO14579 308 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 HOXB8P17481 243 aaPredicted RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 LIMK2P53671 638 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 SEC24CP53992 1094 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 EPHB1P54762 984 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 PRAMEP78395 509 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 ECT2LQ008S8 904 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 IL9RQ01113 521 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 UGP2Q16851 508 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 ACCSLQ4AC99 568 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 DGKKQ5KSL6 1271 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 HHATQ5VTY9 493 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 NEPROQ6NW34 567 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 CNTN4Q8IWV2 1026 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 AHI1Q8N157 1196 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 PAF1Q8N7H5 531 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 OR13J1Q8NGT2 312 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 CALML6Q8TD86 181 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 TCP10LQ8TDR4 215 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 ATXN7L3BQ96GX2 97 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 IQCGQ9H095 443 aaKnown RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 RABEP2Q9H5N1 569 aa19.09■□□□□ 0.65
SMC4-209ENST00000468653 THG1LQ9NWX6 298 aaKnown RBP19.09■□□□□ 0.65
SMC4-209ENST00000468653 ANKRD66B4E2M5 251 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 TM9SF1O15321 606 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 TIMM44O43615 452 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 F7P08709 466 aaPredicted RBP19.08■□□□□ 0.64
SMC4-209ENST00000468653 POLR2EP19388 210 aaKnown RBP19.08■□□□□ 0.64
SMC4-209ENST00000468653 WDR4P57081 412 aaKnown RBP19.08■□□□□ 0.64
SMC4-209ENST00000468653 SNRPD1P62314 119 aaKnown RBP19.08■□□□□ 0.64
SMC4-209ENST00000468653 BCL2L1Q07817 233 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 ATAT1Q5SQI0 421 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 ARMC12Q5T9G4 340 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 MBLAC2Q68D91 279 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 ADIPOR2Q86V24 386 aa19.08■□□□□ 0.64
SMC4-209ENST00000468653 OR2AP1Q8NGE2 309 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms