RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ASNSD1Q9NWL6 643 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 FTSJ1Q9UET6 329 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 IP6K2Q9UHH9 426 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 RASAL2Q9UJF2 1139 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 FBXO10Q9UK96 956 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 YIPF1Q9Y548 306 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 INSL5Q9Y5Q6 135 aa4.23□□□□□ -1.73
TMEM39A-204ENST00000468545 A0A1B0GTL3 188 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CCDC195A0A1B0GUA6 201 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TCRBV5S1A1TA0A578 114 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CTAGE9A4FU28 777 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 C2CD4BA6NLJ0 364 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PI4K2BG5E9Z4 385 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 M0QYT0 321 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 KIF2AO00139 706 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 LINC01565O15544 149 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CEP104O60308 925 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 HSF2BPO75031 334 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 DAB1O75553 588 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 KLHL18O94889 574 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PROSCO94903 275 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CSH1P0DML2 217 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CSH2P0DML3 217 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 IRF1P10914 325 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 RALAP11233 206 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TCF4P15884 667 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 GJA1P17302 382 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 DESP17661 470 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PTPN2P17706 415 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CXCR5P32302 372 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 MATKP42679 507 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 RPL34P49207 117 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CLCN4P51793 760 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TAS2R40P59535 323 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PITX1P78337 314 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 NTHL1P78549 312 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 DEUP1Q05D60 604 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ADCY2Q08462 1091 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 EFEMP1Q12805 493 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 NFATC3Q12968 1075 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PIGHQ14442 188 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 HADHQ16836 314 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 VMACQ2NL98 169 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CCDC14Q49A88 953 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TCEAL5Q5H9L2 206 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 RAB41Q5JT25 222 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 KCNT1Q5JUK3 1230 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 C10orf120Q5SQS8 335 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 RARS2Q5T160 578 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PM20D1Q6GTS8 502 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TRNP1Q6NT89 227 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 OLFML1Q6UWY5 402 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ESPNLQ6ZVH7 1005 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 SLC26A9Q7LBE3 791 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 SCD5Q86SK9 330 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ITIH5Q86UX2 942 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 MON1AQ86VX9 555 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CCDC50Q8IVM0 306 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TCEAL8Q8IYN2 117 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ARHGAP18Q8N392 663 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TRIM58Q8NG06 486 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 KIF18AQ8NI77 898 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ADAMTS17Q8TE56 1095 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 COG1Q8WTW3 980 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM172AQ8WUF8 416 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 PPM1EQ8WY54 764 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 IRGQQ8WZA9 623 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 HSPH1Q92598 858 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CAPZA3Q96KX2 299 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 SPATA17Q96L03 361 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 SLITRK1Q96PX8 696 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TBCBQ99426 244 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CNPY3Q9BT09 278 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 DDX23Q9BUQ8 820 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 MAGEB5Q9BZ81 275 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 NACA2Q9H009 215 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 LMAN2LQ9H0V9 348 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 MS4A5Q9H3V2 200 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM204AQ9H8W3 233 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 POPDC2Q9HBU9 364 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF334Q9HCZ1 680 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 CNGB3Q9NQW8 809 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TLR8Q9NR97 1041 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 ABCC13Q9NSE7 274 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 KLHL11Q9NVR0 708 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 GPATCH2LQ9NWQ4 482 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 HCFC1R1Q9NWW0 138 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 COMMD8Q9NX08 183 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 OSER1Q9NX31 292 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 TRPM5Q9NZQ8 1165 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 FBXW11Q9UKB1 542 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 STAP1Q9ULZ2 295 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 SCML2Q9UQR0 700 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 VWA8A3KMH1 1905 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 MYH10P35580 1976 aa4.22□□□□□ -1.73
TMEM39A-204ENST00000468545 KIAA1671Q9BY89 1806 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 K7ESF4 209 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms