RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 EML3Q32P44 896 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 INO80DQ53TQ3 878 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 NAPEPLDQ6IQ20 393 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ADIPOR2Q86V24 386 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TRABD2AQ86V40 505 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 C12orf40Q86WS4 652 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 RNF135Q8IUD6 432 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 EXOC2Q96KP1 924 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 POLR1EQ9GZS1 481 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TTYH1Q9H313 450 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CENPHQ9H3R5 247 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TRPV4Q9HBA0 871 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 VPS45Q9NRW7 570 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TREX1Q9NSU2 369 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SLC2A6Q9UGQ3 507 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 FAM169AQ9Y6X4 670 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 FAM237BA0A1B0GVD1 139 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 MROH6A6NGR9 719 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 RGS16O15492 202 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 TBX10O75333 385 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NEBLO76041 1014 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 CISD3P0C7P0 127 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NR1D1P20393 614 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 LTBRP36941 435 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 PCSK7Q16549 785 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 ANKRD20A4Q4UJ75 823 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 LY6G5CQ5SRR4 150 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 TRIM68Q6AZZ1 485 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 LINC00523Q86TU6 105 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF354CQ86Y25 554 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 TTC17Q96AE7 1141 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 SMIM14Q96QK8 99 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 IL22Q9GZX6 179 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NSUN3Q9H649 340 aaKnown RBP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 FCF1Q9Y324 198 aaKnown RBP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 INSIG1O15503 277 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 PHBP35232 272 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 PPARDQ03181 441 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NSUN2Q08J23 767 aaKnown RBP eCLIP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 CDH18Q13634 790 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 PTPRRQ15256 657 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 DGKKQ5KSL6 1271 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NCEH1Q6PIU2 408 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 RIBC1Q8N443 379 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
BRCA1-208ENST00000468300 MYLIPQ8WY64 445 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NELL1Q92832 810 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NUDCD1Q96RS6 583 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 CYTH2Q99418 400 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 PLA2G2FQ9BZM2 168 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 ABCB8Q9NUT2 735 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 DZANK1Q9NVP4 752 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 SEPT3Q9UH03 358 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 ZMYM5Q9UJ78 669 aa8.34□□□□□ -1.07
BRCA1-208ENST00000468300 NEDD8-MDP1E9PL57 170 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 ATP9BO43861 1147 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 FZD6O60353 706 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 CYP17A1P05093 508 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 PRKCGP05129 697 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 PDHA1P08559 390 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 ERVK-10P10266 1014 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 TYRP14679 529 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 FSHRP23945 695 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 STX2P32856 288 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 SERPINH1P50454 418 aaKnown RBP8.34□□□□□ -1.08
BRCA1-208ENST00000468300 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.08
BRCA1-208ENST00000468300 DBN1Q16643 649 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 KLHL38Q2WGJ6 581 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 PITRM1Q5JRX3 1037 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 PKN3Q6P5Z2 889 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 CCNJLQ8IV13 435 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 TNS4Q8IZW8 715 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 DNAAF3Q8N9W5 541 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 LSM14AQ8ND56 463 aaKnown RBP8.34□□□□□ -1.08
BRCA1-208ENST00000468300 OR13J1Q8NGT2 312 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 FAM76AQ8TAV0 307 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 MDM1Q8TC05 714 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 OSCP1Q8WVF1 389 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 MYO19Q96H55 970 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 SERAC1Q96JX3 654 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 AGAP2Q99490 1192 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF576Q9H609 170 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 MRM3Q9HC36 420 aaKnown RBP8.34□□□□□ -1.08
BRCA1-208ENST00000468300 PSMC3IPQ9P2W1 217 aaPredicted RBP8.34□□□□□ -1.08
BRCA1-208ENST00000468300 VPS28Q9UK41 221 aa8.34□□□□□ -1.08
BRCA1-208ENST00000468300 CXorf51AA0A1B0GTR3 108 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TRAFD1O14545 582 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 LDB2O43679 373 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 STK19P49842 368 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 CSRP3P50461 194 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ATP1A2P50993 1020 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 PPP2R2AP63151 447 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ITKQ08881 620 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 POU6F1Q14863 301 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 SKIDA1Q1XH10 827 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 SPANXN3Q5MJ09 141 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TEDDM1Q5T9Z0 273 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF449Q6P9G9 518 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms