RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SPTBN4Q9H254 2564 aa9.57□□□□□ -0.88
SDCCAG3-208ENST00000466579 ASCC3Q8N3C0 2202 aaKnown RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 MACROD2A1Z1Q3 448 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 CFAP69A5D8W1 941 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 UPK3BL1B0FP48 263 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 UPK3BL2E5RIL1 263 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 PRAMEF26H0Y7S4 382 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 WNT9AO14904 365 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 PPP1R12AO14974 1030 aaPredicted RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 DDX3YO15523 660 aaKnown RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 FZD6O60353 706 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 CST8O60676 142 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 MAP3K6O95382 1288 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 WNT1P04628 370 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 CFIP05156 583 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZNF883P0CG24 379 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 KRT10P13645 584 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 TNNT1P13805 278 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 CCNB1P14635 433 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 CTSKP43235 329 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 SCNN1BP51168 640 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 NAP1L1P55209 391 aaKnown RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 RWDD2BP57060 319 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 BCL2L1Q07817 233 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 OVGP1Q12889 678 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 GRIK2Q13002 908 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 FGL2Q14314 439 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 IHHQ14623 411 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 AGERQ15109 404 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 PRKD1Q15139 912 aaPredicted RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 TEAD4Q15561 434 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 UGP2Q16851 508 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 RSPO4Q2I0M5 234 aaPredicted RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 ODF2Q5BJF6 829 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 IL27RAQ6UWB1 636 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 NPNTQ6UXI9 565 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 MFSD2AQ8NA29 543 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 ARRDC2Q8TBH0 407 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 FAM174AQ8TBP5 190 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 SNX19Q92543 992 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 RMDN1Q96DB5 314 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 SERAC1Q96JX3 654 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 SLC6A18Q96N87 628 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZNF830Q96NB3 372 aaPredicted RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 LGMNQ99538 433 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 KLF6Q99612 283 aaPredicted RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 RTKNQ9BST9 563 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 POLR1EQ9GZS1 481 aaKnown RBP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 MIR1-1HGQ9H1L0 117 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 NOD2Q9HC29 1040 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 TMEM9BQ9NQ34 198 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 GPR27Q9NS67 375 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 RBM22Q9NW64 420 aaKnown RBP eCLIP9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 PPIL1Q9Y3C6 166 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 HEY1Q9Y5J3 304 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 CAPN6Q9Y6Q1 641 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 KNL1Q8NG31 2342 aa9.56□□□□□ -0.88
SDCCAG3-208ENST00000466579 TMEM131Q92545 1883 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 A0A1B0GVT2 93 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 APOC4-APOC2K7ER74 178 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 KRT86O43790 486 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 APOC2P02655 101 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 HLA-DQB2P05538 268 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 CCDC175P0C221 793 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 PYGMP11217 842 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 PECAM1P16284 738 aaPredicted RBP9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 HNRNPA2B1P22626 353 aaKnown RBP9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 CD38P28907 300 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 MMP12P39900 470 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 CSNK1EP49674 416 aaKnown RBP9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 ELP6Q0PNE2 266 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 TRAF2Q12933 501 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZBTB17Q13105 803 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 XRCC4Q13426 336 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 PUM1Q14671 1186 aaKnown RBP eCLIP9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 SLC14A2Q15849 920 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 ZNF423Q2M1K9 1284 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 SEL1L3Q68CR1 1132 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 DBX2Q6ZNG2 339 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 PEX26Q7Z412 305 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 ABI3BPQ7Z7G0 1075 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 TTC7BQ86TV6 843 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 CBARPQ8N350 705 aaPredicted RBP9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 CNTD1Q8N815 330 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 DENND6BQ8NEG7 585 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 TADA1Q96BN2 335 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 SEMA3CQ99985 751 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 HERPUD2Q9BSE4 406 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 SLC17A9Q9BYT1 436 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 OSBPL8Q9BZF1 889 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 ERVMER34-1Q9H9K5 563 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 NT5MQ9NPB1 228 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 PCDH12Q9NPG4 1184 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 FSCN3Q9NQT6 498 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 HAUS2Q9NVX0 235 aa9.55□□□□□ -0.88
SDCCAG3-208ENST00000466579 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms