RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 GFRA2O00451 464 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 MPOP05164 745 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 SERPINF2P08697 491 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 T-ENOLP0DO92 83 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 EN2P19622 333 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-205ENST00000466192 CSRP3P50461 194 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 KREMEN2Q8NCW0 462 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 MRPS31Q92665 395 aaKnown RBP18.41■□□□□ 0.54
COL9A3-205ENST00000466192 EXOC2Q96KP1 924 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 NOD2Q9HC29 1040 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 HIDE1A8MVS5 230 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 ITM2AO43736 263 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 LYPLA1O75608 230 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 ATP5HO75947 161 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 KRT16P08779 473 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 GJA1P17302 382 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 ARF5P84085 180 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 THOC5Q13769 683 aaKnown RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 GALNT3Q14435 633 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CYTH1Q15438 398 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 DBN1Q16643 649 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CCDC153Q494R4 210 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 ZNF470Q6ECI4 717 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CCDC149Q6ZUS6 474 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 RAPH1Q70E73 1250 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CLEC14AQ86T13 490 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 PARP9Q8IXQ6 854 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CARNMT1Q8N4J0 409 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 H0Y626 953 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 LDB2O43679 373 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 PAPSS2O95340 614 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CD160O95971 181 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 EPOP01588 193 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CKMP06732 381 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CR2P20023 1033 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 MZF1P28698 734 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 USP10Q14694 798 aaKnown RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 RFTN1Q14699 578 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 UGP2Q16851 508 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 CTC1Q2NKJ3 1217 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 NEPROQ6NW34 567 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 C2CD4AQ8NCU7 369 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 SP7Q8TDD2 431 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 SLC22A17Q8WUG5 538 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 SKA1Q96BD8 255 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 PRR11Q96HE9 360 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-205ENST00000466192 TRIB3Q96RU7 358 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 RAD9AQ99638 391 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 STK38LQ9Y2H1 464 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 KCTD3Q9Y597 815 aa18.4■□□□□ 0.54
COL9A3-205ENST00000466192 A0A1W2PRU2 124 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 SNAP91O60641 907 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 FGF1P05230 155 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 CPA3P15088 417 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 HLA-DPA1P20036 260 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 DNAJB1P25685 340 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 HADHAP40939 763 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 SLC1A6P48664 564 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 SCNN1BP51168 640 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 HSF5Q4G112 596 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-205ENST00000466192 RNF135Q8IUD6 432 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 MFSD6LQ8IWD5 586 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 FAM217AQ8IXS0 508 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 HJURPQ8NCD3 748 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-205ENST00000466192 WFDC5Q8TCV5 224 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 TMA16Q96EY4 203 aaKnown RBP18.39■□□□□ 0.53
COL9A3-205ENST00000466192 KCNK4Q9NYG8 393 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 FBXO5Q9UKT4 447 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 IRAK3Q9Y616 596 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 MYOFQ9NZM1 2061 aa18.39■□□□□ 0.53
COL9A3-205ENST00000466192 CCL22O00626 93 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 PHGDHO43175 533 aaKnown RBP18.38■□□□□ 0.53
COL9A3-205ENST00000466192 MGRN1O60291 552 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 AVPR1AP37288 418 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 AQP5P55064 265 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 PLPP4Q5VZY2 271 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 LINGO4Q6UY18 593 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 TTC7BQ86TV6 843 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 ALYREFQ86V81 257 aaKnown RBP18.38■□□□□ 0.53
COL9A3-205ENST00000466192 SLC41A1Q8IVJ1 513 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 BHMTQ93088 406 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 FAM167BQ9BTA0 163 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 AURKAO14965 403 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 CCL16O15467 120 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 INSIG1O15503 277 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 TLL1O43897 1013 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 ZMPSTE24O75844 475 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 HAUS5O94927 633 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 LUC7L3O95232 432 aaKnown RBP18.38■□□□□ 0.53
COL9A3-205ENST00000466192 SERPINE1P05121 402 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 RALBP11234 206 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 CTNNB1P35222 781 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 BMPR1AP36894 532 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 ARSDP51689 593 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 SLC7A9P82251 487 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 ITGA9Q13797 1035 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 SPDYAQ5MJ70 313 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 ZNF783Q6ZMS7 281 aa18.38■□□□□ 0.53
COL9A3-205ENST00000466192 BLOC1S5Q8TDH9 187 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms