RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZP1P60852 638 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 SLC9B1Q4ZJI4 515 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 DCAF12L2Q5VW00 463 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 R3HCC1LQ7Z5L2 792 aaKnown RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 TBC1D26Q86UD7 250 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 DENND6AQ8IWF6 608 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 C7orf57Q8NEG2 295 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 RASSF8Q8NHQ8 419 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 HDAC2Q92769 488 aaKnown RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 ZNF479Q96JC4 524 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 LBHD1Q9BQE6 289 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 SLC25A18Q9H1K4 315 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 CDT1Q9H211 546 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 CATSPERBQ9H7T0 1116 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 BRF2Q9HAW0 419 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 C20orf141Q9NUB4 165 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 ANKRD10Q9NXR5 420 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 SELENONQ9NZV5 590 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 NAALADL1Q9UQQ1 740 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 CARD8Q9Y2G2 431 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 SRPRBQ9Y5M8 271 aaKnown RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 ITIH6Q6UXX5 1313 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 TYW5A2RUC4 315 aaKnown RBP4.47□□□□□ -1.69
LRCH3-211ENST00000466054 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 H0YGN5 161 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 LINC01565O15544 149 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 CAMTA2O94983 1202 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 TBX18O95935 607 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 UBL4AP11441 157 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 TNFAIP3P21580 790 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 GNLYP22749 145 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 PSMA4P25789 261 aaKnown RBP4.47□□□□□ -1.69
LRCH3-211ENST00000466054 DCTDP32321 178 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 CPOXP36551 454 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 ENTPD1P49961 510 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 TMPRSS3P57727 454 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 FAM27E3Q08E93 113 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 LPIN1Q14693 890 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 VEPH1Q14D04 833 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 HIST2H2ACQ16777 129 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-211ENST00000466054 OTUD1Q5VV17 481 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-211ENST00000466054 MAATS1Q7Z4T9 603 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 GPAT4Q86UL3 456 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 PALB2Q86YC2 1186 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 SKA1Q96BD8 255 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 FAM84BQ96KN1 310 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-211ENST00000466054 KLHL15Q96M94 604 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 H2AFJQ9BTM1 129 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 PLAC1Q9HBJ0 212 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 CAMK2AQ9UQM7 478 aa4.47□□□□□ -1.69
LRCH3-211ENST00000466054 TDRD9Q8NDG6 1382 aaKnown RBP4.46□□□□□ -1.7
LRCH3-211ENST00000466054 A0A087X0M5 115 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 A0A1B0GX30 115 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 CHL1O00533 1208 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 CYP1A2P05177 515 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 HOXB5P09067 269 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 SRD5A1P18405 259 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 MYF6P23409 242 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 MAN1A1P33908 653 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 KCNJ4P48050 445 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 RFX2P48378 723 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 CCR9P51686 369 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 P2RX3P56373 397 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 PPATQ06203 517 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 NEXNQ0ZGT2 675 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 ST3GAL1Q11201 340 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 RUNX2Q13950 521 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 GPR18Q14330 331 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 GSTA3Q16772 222 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 OTUD3Q5T2D3 398 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-211ENST00000466054 TXNDC8Q6A555 127 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 CPLX2Q6PUV4 134 aaKnown RBP4.46□□□□□ -1.7
LRCH3-211ENST00000466054 ATF7IPQ6VMQ6 1270 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 TRILQ7L0X0 811 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 DIS3L2Q8IYB7 885 aaKnown RBP4.46□□□□□ -1.7
LRCH3-211ENST00000466054 KIAA2013Q8IYS2 634 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 TDRD7Q8NHU6 1098 aaKnown RBP4.46□□□□□ -1.7
LRCH3-211ENST00000466054 METTL6Q8TCB7 284 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 SNAPC3Q92966 411 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 CAMK1GQ96NX5 476 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 YME1L1Q96TA2 773 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 POLDIP3Q9BY77 421 aaKnown RBP4.46□□□□□ -1.7
LRCH3-211ENST00000466054 NPFFR1Q9GZQ6 430 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 LHPPQ9H008 270 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 NCKIPSDQ9NZQ3 722 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 IL36RNQ9UBH0 155 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 NDRG3Q9UGV2 375 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 A4GNTQ9UNA3 340 aa4.46□□□□□ -1.7
LRCH3-211ENST00000466054 KLRF2D3W0D1 207 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 ACOT8O14734 319 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 LDLRAD4O15165 306 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 SEC14L2O76054 403 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 HSPA1AP0DMV8 641 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 HSPA1BP0DMV9 641 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 HOXB2P14652 356 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 CHMP24386 653 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms