RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 VCPIP1Q96JH7 1222 aa12.96□□□□□ -0.33
SRM-203ENST00000465788 ZNF641Q96N77 438 aaPredicted RBP12.96□□□□□ -0.33
SRM-203ENST00000465788 ERGIC2Q96RQ1 377 aa12.96□□□□□ -0.33
SRM-203ENST00000465788 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
SRM-203ENST00000465788 SEPT11Q9NVA2 429 aaKnown RBP12.96□□□□□ -0.33
SRM-203ENST00000465788 UBA2Q9UBT2 640 aaPredicted RBP12.96□□□□□ -0.33
SRM-203ENST00000465788 LIMA1Q9UHB6 759 aaKnown RBP12.96□□□□□ -0.33
SRM-203ENST00000465788 ITM2BQ9Y287 266 aa12.96□□□□□ -0.33
SRM-203ENST00000465788 ACTL7AQ9Y615 435 aa12.96□□□□□ -0.33
SRM-203ENST00000465788 COL6A6A6NMZ7 2263 aa12.96□□□□□ -0.34
SRM-203ENST00000465788 FAM170AA1A519 330 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 TSPAN11A1L157 253 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 ARHGAP42A6NI28 874 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 SPINT1O43278 529 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 CCP110O43303 1012 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 CREB3O43889 395 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 MMP20O60882 483 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 RASGRP1O95267 797 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 CTSEP14091 401 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 FERP16591 822 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 CDK11BP21127 795 aaKnown RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 CSNK1DP48730 415 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 KLK7P49862 253 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 ADKP55263 362 aaKnown RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 CXADRP78310 365 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 MYL5Q02045 173 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 LRRC14Q15048 493 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 AGERQ15109 404 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 RAB6CQ53S08 254 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 GUSBP11Q6P575 273 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 PHLDB2Q86SQ0 1253 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 ARL14Q8N4G2 192 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 TP53I13Q8NBR0 393 aaPredicted RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 WDR36Q8NI36 951 aaKnown RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 PCDHB18PQ96TA0 734 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 AGPAT1Q99943 283 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 LRRC61Q9BV99 259 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 RAB6CQ9H0N0 254 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
SRM-203ENST00000465788 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 TMEM63CQ9P1W3 806 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 KLF15Q9UIH9 416 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 GGT7Q9UJ14 662 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 FZD10Q9ULW2 581 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 MYO6Q9UM54 1294 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 RAI2Q9Y5P3 530 aa12.95□□□□□ -0.34
SRM-203ENST00000465788 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
SRM-203ENST00000465788 LRRC10BA6NIK2 292 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 EPHB6O15197 1021 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 TIMP2P16035 220 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 TGM2P21980 687 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 HK3P52790 923 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 TPI1P60174 286 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 UBXN1Q04323 297 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 EIF3IQ13347 325 aaKnown RBP12.94□□□□□ -0.34
SRM-203ENST00000465788 SPIDRQ14159 915 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 UGP2Q16851 508 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 ACAD10Q6JQN1 1059 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 LEKR1Q6ZMV7 388 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 GKN2Q86XP6 184 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 RBFAQ8N0V3 343 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 ARL10Q8N8L6 244 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 SUV39H2Q9H5I1 410 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 ATP13A3Q9H7F0 1226 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 ASCL3Q9NQ33 180 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 PADI4Q9UM07 663 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 ENTPD2Q9Y5L3 495 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
SRM-203ENST00000465788 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 TCRBV5S1A1TA0A578 114 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 MUSKO15146 869 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 YY2O15391 372 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 PRAMEF11O60813 436 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 GCATO75600 419 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 GJB6O95452 261 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 TSHRP16473 764 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 KELP23276 732 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 NFKBIAP25963 317 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 SERPINA4P29622 427 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 POLR2LP62875 67 aaKnown RBP12.93□□□□□ -0.34
SRM-203ENST00000465788 MTM1Q13496 603 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 RFTN1Q14699 578 aaPredicted RBP12.93□□□□□ -0.34
SRM-203ENST00000465788 NFATC4Q14934 902 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 IRF4Q15306 451 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 STX1AQ16623 288 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 C3orf38Q5JPI3 329 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 TPRG1LQ5T0D9 272 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 TMCO4Q5TGY1 634 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 PSTKQ8IV42 348 aaKnown RBP12.93□□□□□ -0.34
SRM-203ENST00000465788 SLC35F3Q8IY50 421 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 MCOLN2Q8IZK6 566 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 PYROXD2Q8N2H3 581 aa12.93□□□□□ -0.34
SRM-203ENST00000465788 SNRNP27Q8WVK2 155 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms