RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 UNC79Q9P2D8 2635 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 MYO9AB2RTY4 2548 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 PRAMEF33A0A0G2JMD5 474 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 GOLGA6L4A6NEF3 574 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 TMX2-CTNND1H3BSU7 103 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 BIN1O00499 593 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 PRAMEF10O60809 474 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 ALPIP09923 528 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 ITIH1P19827 911 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 ETFBP38117 255 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 ETV5P41161 510 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 BLKP51451 505 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 NRG1Q02297 640 aaPredicted RBP11.91□□□□□ -0.5
CNOT4-208ENST00000465721 ELOCQ15369 112 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 EXOC3L4Q17RC7 722 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 RAB6CQ53S08 254 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 COLEC12Q5KU26 742 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 LVRNQ6Q4G3 990 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 HID1Q8IV36 788 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 FAM71AQ8IYT1 594 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 HTR3CQ8WXA8 447 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 TSACCQ96A04 125 aaPredicted RBP11.91□□□□□ -0.5
CNOT4-208ENST00000465721 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 TMEM74Q96NL1 305 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 SEMA3CQ99985 751 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 ARHGAP9Q9BRR9 750 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 C1QTNF7Q9BXJ2 289 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 EDEM3Q9BZQ6 932 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 RAB6CQ9H0N0 254 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 FOXJ2Q9P0K8 574 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 TMEM59LQ9UK28 342 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
CNOT4-208ENST00000465721 FAM170AA1A519 330 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 FOXN3O00409 490 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 RASGRP1O95267 797 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 POP4O95707 220 aaKnown RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 JMJD7P0C870 316 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 ITIH2P19823 946 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 MAPKAPK2P49137 400 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 PEX5P50542 639 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 GEMIN4P57678 1058 aaKnown RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 SNRPD1P62314 119 aaKnown RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 ZFP36L1Q07352 338 aaKnown RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 NFATC4Q14934 902 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 POLD3Q15054 466 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 TBR1Q16650 682 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 WSCD2Q2TBF2 565 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 MYLK3Q32MK0 819 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 LEKR1Q6ZMV7 388 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 TMPRSS9Q7Z410 1059 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 ZFAND4Q86XD8 727 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 DTX1Q86Y01 620 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 CCNJLQ8IV13 435 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 TMEM35BQ8NCS4 154 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 GPR156Q8NFN8 814 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 CXorf40AQ8TE69 158 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 SCG3Q8WXD2 468 aaKnown RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 C18orf8Q96DM3 657 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 PDXPQ96GD0 296 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 WRAP53Q9BUR4 548 aaKnown RBP11.9□□□□□ -0.5
CNOT4-208ENST00000465721 LRRN3Q9H3W5 708 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 TMEM248Q9NWD8 314 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 DKK3Q9UBP4 350 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 COQ6Q9Y2Z9 468 aa11.9□□□□□ -0.5
CNOT4-208ENST00000465721 FAM72CH0Y354 149 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 TMCC1O94876 653 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 TIMP2P16035 220 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 RHOQP17081 205 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 MANEAQ5SRI9 462 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 FAM72AQ5TYM5 149 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 FAM72DQ6L9T8 149 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 ZNF574Q6ZN55 896 aaPredicted RBP11.89□□□□□ -0.51
CNOT4-208ENST00000465721 SPRED1Q7Z699 444 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 TTC7BQ86TV6 843 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 FAM72BQ86X60 149 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 GKN2Q86XP6 184 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 SFTPA2Q8IWL1 248 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 OR6C4Q8NGE1 309 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 RBM15Q96T37 977 aaKnown RBP eCLIP11.89□□□□□ -0.51
CNOT4-208ENST00000465721 MAGEH1Q9H213 219 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 DNAJC12Q9UKB3 198 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
CNOT4-208ENST00000465721 PRRC2CQ9Y520 2896 aaKnown RBP11.89□□□□□ -0.51
CNOT4-208ENST00000465721 CENPEQ02224 2701 aa11.88□□□□□ -0.51
CNOT4-208ENST00000465721 TSPAN11A1L157 253 aa11.88□□□□□ -0.51
CNOT4-208ENST00000465721 TMEM110-MUSTN1A8MSY1 372 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms