RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GBA3Q9H227 469 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 TBC1D17Q9HA65 648 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
EXOSC3-203ENST00000465229 F5H423 210 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 GSRP00390 522 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 PSMB4P28070 264 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 CSNK1DP48730 415 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SCNN1BP51168 640 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SNRPD1P62314 119 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 CARD16Q5EG05 197 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 DPY19L3Q6ZPD9 716 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 TDRPQ86YL5 185 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 VOPP1Q96AW1 172 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 IMP4Q96G21 291 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 FCRL5Q96RD9 977 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 GORASP1Q9BQQ3 440 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 NOD2Q9HC29 1040 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 HAUS2Q9NVX0 235 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 HECAQ9UBI9 543 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 RSPH14Q9UHP6 348 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 INSIG1O15503 277 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 DCXO43602 365 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 BNIP3LO60238 219 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 ADAM23O75077 832 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 CDH16O75309 829 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 KLF8O95600 359 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 EPHX1P07099 455 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 MMP2P08253 660 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 NTSR1P30989 418 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 MAGEA6P43360 314 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 GUCY1A3Q02108 690 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SIGLEC14Q08ET2 396 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 RASA2Q15283 850 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 MYLK3Q32MK0 819 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 C9orf64Q5T6V5 341 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 FAXCQ5TGI0 409 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 PPP1R21Q6ZMI0 780 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SRLQ86TD4 932 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 TXNDC5Q8NBS9 432 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 OR6K2Q8NGY2 324 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SPATA22Q8NHS9 363 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 C9orf72Q96LT7 481 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 NUDCD1Q96RS6 583 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 GABRG3Q99928 467 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 EPN3Q9H201 632 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 RAB6BQ9NRW1 208 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 SUN2Q9UH99 717 aa17.1■□□□□ 0.33
EXOSC3-203ENST00000465229 EDDM13A0A1B0GTR0 161 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 E7EVH7 732 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 SIN3BO75182 1162 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 IGSF6O95976 241 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 CES1P23141 567 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 CCNHP51946 323 aaPredicted RBP17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 LONRF1Q17RB8 773 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 Q6ZS52 159 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 RYBPQ8N488 228 aaPredicted RBP17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 CHST14Q8NCH0 376 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 RPLP0P6Q8NHW5 317 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 TADA1Q96BN2 335 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 OXNAD1Q96HP4 312 aaPredicted RBP17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 SCUBE2Q9NQ36 999 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 PRSS16Q9NQE7 514 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 TECTAO75443 2155 aa17.09■□□□□ 0.33
EXOSC3-203ENST00000465229 STK25O00506 426 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 MT-CYBP00156 380 aaPredicted RBP17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 GKP32189 559 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 FDFT1P37268 417 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 CD86P42081 329 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 RECQLP46063 649 aaPredicted RBP17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 LRRC32Q14392 662 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 KCNJ11Q14654 390 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 RALGPS1Q5JS13 557 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 ANKRD22Q5VYY1 191 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 SDE2Q6IQ49 451 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 PKN3Q6P5Z2 889 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 NCEH1Q6PIU2 408 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 TRMT11Q7Z4G4 463 aaKnown RBP17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 PDIK1LQ8N165 341 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 OSBPL6Q9BZF3 934 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 EURLQ9NYK6 297 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 UBP1Q9NZI7 540 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 ACTL7BQ9Y614 415 aa17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 MUC22E2RYF6 1773 aaPredicted RBP17.08■□□□□ 0.32
EXOSC3-203ENST00000465229 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 SLCO1A2P46721 670 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 AP1S1P61966 158 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 PDIA2Q13087 525 aaKnown RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 HSF5Q4G112 596 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 TRIM67Q6ZTA4 783 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 KLHDC8BQ8IXV7 354 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 ZBED8Q8IZ13 594 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms