RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ZNF470Q6ECI4 717 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 RAPH1Q70E73 1250 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 C16orf59Q7L2K0 433 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 ENDOVQ8N8Q3 282 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 FAM13CQ8NE31 585 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 CYP2S1Q96SQ9 504 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 FAM95CA0A1B0GW59 222 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 E2F8A0AVK6 867 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 ZBBXA8MT70 800 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 TGM5O43548 720 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 APOA4P06727 396 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 SPATA31D3P0C874 917 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 CPA3P15088 417 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 KCNA4P22459 653 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 CALB2P22676 271 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 GRK2P25098 689 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 GMPRP36959 345 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 IRF9Q00978 393 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 RNF219Q5W0B1 726 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 ZCCHC23Q6ZST2 131 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 SPATA31D4Q6ZUB0 917 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 LONP2Q86WA8 852 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 SKA1Q96BD8 255 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 TSNARE1Q96NA8 513 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 MID2Q9UJV3 735 aa21.9■■□□□ 1.1
PDLIM2-216ENST00000464275 SLC7A4O43246 635 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 GJB3O75712 270 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 SERPINE1P05121 402 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 COL6A2P12110 1019 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 HDCP19113 662 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 CES1P23141 567 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 GLDCP23378 1020 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 NUMBP49757 651 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 SLC12A1Q13621 1099 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 CXorf57Q6NSI4 855 aaKnown RBP21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 SLC41A1Q8IVJ1 513 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 C10orf107Q8IVU9 208 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 ARL14EPQ8N8R7 260 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 OR13J1Q8NGT2 312 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 PEX13Q92968 403 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 SLC22A12Q96S37 553 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 MMADHCQ9H3L0 296 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 KCNK4Q9NYG8 393 aa21.89■■□□□ 1.09
PDLIM2-216ENST00000464275 CBX6O95503 412 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 NDST3O95803 873 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 TXNDC8Q6A555 127 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 GALNT7Q86SF2 657 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 LMNTD2Q8IXW0 634 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 HJURPQ8NCD3 748 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 ADAMTS19Q8TE59 1207 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 MUC3BQ9H195 1237 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 MFSD1Q9H3U5 465 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 NMRAL1Q9HBL8 299 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 HEY2Q9UBP5 337 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 ACTL7AQ9Y615 435 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 ALPK3Q96L96 1907 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 TYW5A2RUC4 315 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 LDB2O43679 373 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 TBL1XO60907 577 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 LUC7L3O95232 432 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 FGBP02675 491 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 LRG1P02750 347 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 LINC00271P0C7V0 271 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 SLC1A6P48664 564 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 RAB10P61026 200 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 CYTH1Q15438 398 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 CMPK2Q5EBM0 449 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 Q6ZNB5 142 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 CCDC149Q6ZUS6 474 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 ARID3BQ8IVW6 561 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 MRPS31Q92665 395 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 NSL1Q96IY1 281 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 C1QTNF1Q9BXJ1 281 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 C20orf27Q9GZN8 174 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 ZNF395Q9H8N7 513 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 CPQQ9Y646 472 aa21.88■■□□□ 1.09
PDLIM2-216ENST00000464275 CBX4O00257 560 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 INSIG1O15503 277 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 CXCL14O95715 111 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 MYL2P10916 166 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 RALBP11234 206 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 STMN1P16949 149 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 CR2P20023 1033 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 SAT1P21673 171 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 GABRR2P28476 465 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 CRABP2P29373 138 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 LEPRP48357 1165 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 CLNS1AP54105 237 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 PPIGQ13427 754 aaKnown RBP eCLIP21.87■■□□□ 1.091e-8■■■□□ 18.4
PDLIM2-216ENST00000464275 LILRA6Q6PI73 481 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 SREK1Q8WXA9 508 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 CLP1Q92989 425 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 PTCD3Q96EY7 689 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 TRIB3Q96RU7 358 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 BTBD10Q9BSF8 475 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 TMEM106CQ9BVX2 250 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 RIMKLBQ9ULI2 386 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 H0Y626 953 aa21.87■■□□□ 1.09
PDLIM2-216ENST00000464275 PHGDHO43175 533 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms