RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 PRPF39Q86UA1 669 aaKnown RBP15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 HORMAD1Q86X24 394 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 REXO1L1PQ8IX06 675 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ZCCHC9Q8N567 271 aaKnown RBP15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SPOCK2Q92563 424 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 FEM1CQ96JP0 617 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SEMA3CQ99985 751 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TM9SF3Q9HD45 589 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 GGT7Q9UJ14 662 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 PCDHGC4Q9Y5F7 938 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 CFAP54Q96N23 3096 aa15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TP53BP1Q12888 1972 aaPredicted RBP15.55■□□□□ 0.08
RAB11FIP3-208ENST00000464263 CACNA1EQ15878 2313 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 LNP1A1A4G5 178 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 PRR5-ARHGAP8B1AHC4 643 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 APOC4-APOC2K7ER74 178 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 WNT9AO14904 365 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TSPAN6O43657 245 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SOCS5O75159 536 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 APOC2P02655 101 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 HLA-DQB2P05538 268 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 MAT2AP31153 395 aaKnown RBP15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 NUDT1P36639 197 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SUOXP51687 545 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 RPS21P63220 83 aaKnown RBP15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 DSC2Q02487 901 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ITKQ08881 620 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 NIPAL4Q0D2K0 466 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TMEM259Q4ZIN3 620 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 LRRC73Q5JTD7 316 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 FAM182AQ5T1J6 154 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SEL1L3Q68CR1 1132 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 C12orf50Q8NA57 414 aaPredicted RBP15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ARRDC2Q8TBH0 407 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TFB1MQ8WVM0 346 aaKnown RBP15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 HAUS1Q96CS2 278 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 NUSAP1Q9BXS6 441 aaKnown RBP15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 POLR1EQ9GZS1 481 aaKnown RBP15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ITM2BQ9Y287 266 aa15.54■□□□□ 0.08
RAB11FIP3-208ENST00000464263 GVINP1Q7Z2Y8 2422 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TMEM131Q92545 1883 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 UPK3BL1B0FP48 263 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 UPK3BL2E5RIL1 263 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 RIOK3O14730 519 aaKnown RBP15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 GDF9O60383 454 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TJP3O95049 919 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 CFIP05156 583 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 CSNK1EP49674 416 aaKnown RBP15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 RACK1P63244 317 aaKnown RBP15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 BNC1Q01954 994 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 LMNB2Q03252 620 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TRAF2Q12933 501 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 XRCC4Q13426 336 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 FGL2Q14314 439 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TMEM52BQ4KMG9 183 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TEX44Q53QW1 395 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 KIAA1161Q6NSJ0 714 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ZC3H18Q86VM9 953 aaKnown RBP15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ACTL9Q8TC94 416 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 KLK6Q92876 244 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 C1QTNF2Q9BXJ5 285 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 PCDH12Q9NPG4 1184 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 FSCN3Q9NQT6 498 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 HAUS2Q9NVX0 235 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 DMTF1Q9Y222 760 aa15.53■□□□□ 0.08
RAB11FIP3-208ENST00000464263 DMXL1Q9Y485 3027 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 A0A1W2PQ67 120 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 A0A1W2PR77 199 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 IGLON5A6NGN9 336 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 HACD1B0YJ81 288 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ARHGAP33O14559 1287 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SLC31A1O15431 190 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 WNT1P04628 370 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 MMP2P08253 660 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ENGP17813 658 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 PTPN3P26045 913 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 AFF3P51826 1226 aaKnown RBP15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 POLR2LP62875 67 aaKnown RBP15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 OTUD4Q01804 1114 aaKnown RBP15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 WASHC5Q12768 1159 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 KLF1Q13351 362 aaPredicted RBP15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 RPS6KA1Q15418 735 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 AASDHQ4L235 1098 aaPredicted RBP15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SETMARQ53H47 684 aaPredicted RBP15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 CFAP58Q5T655 872 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ZSCAN30Q86W11 494 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 TRIM58Q8NG06 486 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SERAC1Q96JX3 654 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SLC6A18Q96N87 628 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 ALS2CR12Q96Q35 445 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 SLC17A9Q9BYT1 436 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 CEP41Q9BYV8 373 aa15.52■□□□□ 0.08
RAB11FIP3-208ENST00000464263 PRAMEF26H0Y7S4 382 aa15.51■□□□□ 0.07
RAB11FIP3-208ENST00000464263 NEMP1O14524 444 aa15.51■□□□□ 0.07
RAB11FIP3-208ENST00000464263 CDX4O14627 284 aaPredicted RBP15.51■□□□□ 0.07
RAB11FIP3-208ENST00000464263 MTSS1O43312 755 aa15.51■□□□□ 0.07
RAB11FIP3-208ENST00000464263 FZD6O60353 706 aa15.51■□□□□ 0.07
RAB11FIP3-208ENST00000464263 MMP20O60882 483 aa15.51■□□□□ 0.07
RAB11FIP3-208ENST00000464263 NEBLO76041 1014 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms