RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PNPLA1Q8N8W4 532 aa21.08■□□□□ 0.97
CD58-204ENST00000464088 OR6K2Q8NGY2 324 aa21.08■□□□□ 0.97
CD58-204ENST00000464088 P3H4Q92791 437 aa21.08■□□□□ 0.97
CD58-204ENST00000464088 BRD8Q9H0E9 1235 aa21.08■□□□□ 0.97
CD58-204ENST00000464088 SERGEFQ9UGK8 458 aa21.08■□□□□ 0.97
CD58-204ENST00000464088 CYP8B1Q9UNU6 501 aa21.08■□□□□ 0.97
CD58-204ENST00000464088 APOBEC2Q9Y235 224 aaKnown RBP21.08■□□□□ 0.97
CD58-204ENST00000464088 C1QTNF3-AMACRE9PGA6 284 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 PPP1R12AO14974 1030 aaPredicted RBP21.07■□□□□ 0.96
CD58-204ENST00000464088 INSIG1O15503 277 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 CBFA2T3O75081 653 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 LEFTY1O75610 366 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 TJP3O95049 919 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 ACADMP11310 421 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 CR2P20023 1033 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 PRKD1Q15139 912 aaPredicted RBP21.07■□□□□ 0.96
CD58-204ENST00000464088 NOMO1Q15155 1222 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 TTC31Q49AM3 519 aaPredicted RBP21.07■□□□□ 0.96
CD58-204ENST00000464088 ZNF569Q5MCW4 686 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 MARC1Q5VT66 337 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 FAM46CQ5VWP2 391 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 SLC35F6Q8N357 371 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 CCNYQ8ND76 341 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 GRIN3AQ8TCU5 1115 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 NSMCE1Q8WV22 266 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 HAUS1Q96CS2 278 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 LRIG1Q96JA1 1093 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 NSMCE3Q96MG7 304 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 HSPA12BQ96MM6 686 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 MGME1Q9BQP7 344 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 SUSD2Q9UGT4 822 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 JRKLQ9Y4A0 524 aa21.07■□□□□ 0.96
CD58-204ENST00000464088 HELZ2Q9BYK8 2649 aaKnown RBP21.07■□□□□ 0.96
CD58-204ENST00000464088 A0A1W2PP55 124 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 KIF5CO60282 957 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 CCNB1P14635 433 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 HSPA9P38646 679 aaKnown RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 MMP13P45452 471 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 RENBPP51606 427 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 IFI35P80217 286 aaPredicted RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 ZNF235Q14590 738 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 RYBPQ8N488 228 aaPredicted RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 MDM1Q8TC05 714 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 ACTL9Q8TC94 416 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 HNRNPLLQ8WVV9 542 aaKnown RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 ARRDC3Q96B67 414 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 IL12RB2Q99665 862 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 CPEB1Q9BZB8 566 aaKnown RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 ZDHHC5Q9C0B5 715 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 ZDHHC6Q9H6R6 413 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 FBXL12Q9NXK8 326 aa21.06■□□□□ 0.96
CD58-204ENST00000464088 WSB2Q9NYS7 404 aaPredicted RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 ASH1LQ9NR48 2969 aaKnown RBP21.06■□□□□ 0.96
CD58-204ENST00000464088 BPTFQ12830 3046 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 TCRBV7S2A1N4TA0A589 114 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 KCNK1O00180 336 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 KRIT1O00522 736 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 KCNK3O14649 394 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 ENC1O14682 589 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 CD6P30203 668 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 OXTRP30559 389 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 OTUD4Q01804 1114 aaKnown RBP21.05■□□□□ 0.96
CD58-204ENST00000464088 AP1B1Q10567 949 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 ZBTB17Q13105 803 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 XRCC4Q13426 336 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 SEL1L2Q5TEA6 688 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 ALG1LQ6GMV1 187 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 B4GALNT4Q76KP1 1039 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 SRLQ86TD4 932 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 SLCO6A1Q86UG4 719 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 BBS5Q8N3I7 341 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 QKIQ96PU8 341 aaKnown RBP eCLIP21.05■□□□□ 0.962e-10■■■■■ 43
CD58-204ENST00000464088 NEUROG2Q9H2A3 272 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 RBM22Q9NW64 420 aaKnown RBP eCLIP21.05■□□□□ 0.963e-6■■■■□ 26.3
CD58-204ENST00000464088 AMACRQ9UHK6 382 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 FZD4Q9ULV1 537 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 RAXQ9Y2V3 346 aa21.05■□□□□ 0.96
CD58-204ENST00000464088 HACD1B0YJ81 288 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 C10orf142B7Z368 130 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 PLK4O00444 970 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 KPNA3O00505 521 aaPredicted RBP21.04■□□□□ 0.96
CD58-204ENST00000464088 MAXP61244 160 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 RAD51Q06609 339 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 POM121L1PQ3SYA9 428 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 SYCP2LQ5T4T6 812 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 NCEH1Q6PIU2 408 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 ZC3H18Q86VM9 953 aaKnown RBP21.04■□□□□ 0.96
CD58-204ENST00000464088 SLC13A5Q86YT5 568 aaPredicted RBP21.04■□□□□ 0.96
CD58-204ENST00000464088 CNTD1Q8N815 330 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 TFB1MQ8WVM0 346 aaKnown RBP21.04■□□□□ 0.96
CD58-204ENST00000464088 TOE1Q96GM8 510 aaKnown RBP21.04■□□□□ 0.96
CD58-204ENST00000464088 NUDCD1Q96RS6 583 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 OSBPL1AQ9BXW6 950 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 NT5MQ9NPB1 228 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 PCOLCE2Q9UKZ9 415 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 ATP8A1Q9Y2Q0 1164 aa21.04■□□□□ 0.96
CD58-204ENST00000464088 URB1O60287 2271 aaKnown RBP21.03■□□□□ 0.96
CD58-204ENST00000464088 RNASEH2AO75792 299 aaKnown RBP21.03■□□□□ 0.96
CD58-204ENST00000464088 JCHAINP01591 159 aa21.03■□□□□ 0.96
CD58-204ENST00000464088 HLA-DQB2P05538 268 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms