RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TBC1D31Q96DN5 1066 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 EDEM3Q9BZQ6 932 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 SYNDIG1Q9H7V2 258 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 EPB41L5Q9HCM4 733 aa17.48■□□□□ 0.39
HMGN1-210ENST00000464078 METTL5Q9NRN9 209 aaKnown RBP17.48■□□□□ 0.39
HMGN1-210ENST00000464078 A0A1W2PQM1 296 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 TSPAN11A1L157 253 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 F8VZ95 297 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 NVLO15381 856 aaKnown RBP17.47■□□□□ 0.39
HMGN1-210ENST00000464078 RASGRP1O95267 797 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 IGSF6O95976 241 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 SDC4P31431 198 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 ELP6Q0PNE2 266 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 NFATC4Q14934 902 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 LRRC14Q15048 493 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 TMEM52BQ4KMG9 183 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 VWA3BQ502W6 1294 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 RAB6CQ53S08 254 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 INO80DQ53TQ3 878 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-210ENST00000464078 KLHDC7AQ5VTJ3 777 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 NAA35Q5VZE5 725 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 FBXO39Q8N4B4 442 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 MLKLQ8NB16 471 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 HCAR2Q8TDS4 363 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 CPA5Q8WXQ8 436 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 NTAN1Q96AB6 310 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 TMEM74Q96NL1 305 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 WRAP53Q9BUR4 548 aaKnown RBP17.47■□□□□ 0.39
HMGN1-210ENST00000464078 CPEB1Q9BZB8 566 aaKnown RBP17.47■□□□□ 0.39
HMGN1-210ENST00000464078 RAB6CQ9H0N0 254 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 DOLKQ9UPQ8 538 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 UNC13CQ8NB66 2214 aa17.47■□□□□ 0.39
HMGN1-210ENST00000464078 C2CD4BA6NLJ0 364 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 GJB6O95452 261 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 RPLP0P05388 317 aaKnown RBP17.46■□□□□ 0.39
HMGN1-210ENST00000464078 LIPCP11150 499 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 UCHL3P15374 230 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 TIMP2P16035 220 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 MMP8P22894 467 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 HTR1BP28222 390 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 CSRP3P50461 194 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 INHBCP55103 352 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 CDO1Q16878 200 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 C15orf59Q2T9L4 293 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-210ENST00000464078 CCDC14Q49A88 953 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 LEKR1Q6ZMV7 388 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 GKN2Q86XP6 184 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 HID1Q8IV36 788 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 EXD3Q8N9H8 876 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 ATL2Q8NHH9 583 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 RXFP2Q8WXD0 754 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 CENPIQ92674 756 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-210ENST00000464078 TMEM159Q96B96 161 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 SGF29Q96ES7 293 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 NOL6Q9H6R4 1146 aaKnown RBP17.46■□□□□ 0.39
HMGN1-210ENST00000464078 GULP1Q9UBP9 304 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 NOCTQ9UK39 431 aaKnown RBP17.46■□□□□ 0.39
HMGN1-210ENST00000464078 GPR34Q9UPC5 381 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 DGKBQ9Y6T7 804 aa17.46■□□□□ 0.39
HMGN1-210ENST00000464078 CYSRT1A8MQ03 144 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 PYCARD-AS1I3L0S3 204 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 ARHGAP6O43182 974 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 BUB1O43683 1085 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 MMEP08473 750 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 PLEKP08567 350 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-210ENST00000464078 CTSEP14091 401 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 HDAC4P56524 1084 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 RHOAP61586 193 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 CCL7P80098 99 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 BECN1Q14457 450 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 WSCD2Q2TBF2 565 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 LINC00303Q3SY05 128 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 PRICKLE2Q7Z3G6 844 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 CCDC185Q8N715 623 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 RTL3Q8N8U3 475 aaKnown RBP17.45■□□□□ 0.38
HMGN1-210ENST00000464078 GPR156Q8NFN8 814 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 TSACCQ96A04 125 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-210ENST00000464078 RBM15Q96T37 977 aaKnown RBP eCLIP17.45■□□□□ 0.38
HMGN1-210ENST00000464078 TUBGCP2Q9BSJ2 902 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 STK33Q9BYT3 514 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 FOXP3Q9BZS1 431 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 STARD5Q9NSY2 213 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 SIRPGQ9P1W8 387 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 APPL1Q9UKG1 709 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 ANKRD36A6QL64 1941 aa17.45■□□□□ 0.38
HMGN1-210ENST00000464078 FAM170AA1A519 330 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 CYP1A1P04798 512 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-210ENST00000464078 JMJD7P0C870 316 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 PNLIPP16233 465 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 ITIH2P19823 946 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 GSCP56915 257 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-210ENST00000464078 YBEYP58557 167 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-210ENST00000464078 SRP54P61011 504 aaKnown RBP17.44■□□□□ 0.38
HMGN1-210ENST00000464078 GRM3Q14832 879 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 TPD52L1Q16890 204 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-210ENST00000464078 CERCAMQ5T4B2 595 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 USP53Q70EK8 1073 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 JAMLQ86YT9 394 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 GPT2Q8TD30 523 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms