RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 WRAP53Q9BUR4 548 aaKnown RBP14.64□□□□□ -0.07
SMC1A-204ENST00000463684 B3GNT4Q9C0J1 378 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 PDCL3Q9H2J4 239 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 PPARGC1AQ9UBK2 798 aaKnown RBP14.64□□□□□ -0.07
SMC1A-204ENST00000463684 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 KLQ9UEF7 1012 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 RNF215Q9Y6U7 377 aa14.64□□□□□ -0.07
SMC1A-204ENST00000463684 RP1P56715 2156 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 C9orf172C9J069 976 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 PNLIPP16233 465 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 WT1P19544 449 aaPredicted RBP14.63□□□□□ -0.07
SMC1A-204ENST00000463684 ETV5P41161 510 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 NFATC4Q14934 902 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 FAM102AQ5T9C2 384 aaPredicted RBP14.63□□□□□ -0.07
SMC1A-204ENST00000463684 FAM46DQ8NEK8 389 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 ZNF564Q8TBZ8 553 aaPredicted RBP14.63□□□□□ -0.07
SMC1A-204ENST00000463684 SHC3Q92529 594 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 APOOQ9BUR5 198 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 RETREG1Q9H6L5 497 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 PLCB1Q9NQ66 1216 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 LRIT1Q9P2V4 623 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 APEX2Q9UBZ4 518 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 KIF26BQ2KJY2 2108 aa14.63□□□□□ -0.07
SMC1A-204ENST00000463684 PPP1R3GB7ZBB8 358 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 STMND1H3BQB6 276 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 FGFR1OPO95684 399 aaKnown RBP14.62□□□□□ -0.07
SMC1A-204ENST00000463684 TIMP2P16035 220 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 SLC9A1P19634 815 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 ITIH2P19823 946 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 SCNN1AP37088 669 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 ATP1A2P50993 1020 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 ELP6Q0PNE2 266 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 KCNAB2Q13303 367 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 INPP5AQ14642 412 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 CERCAMQ5T4B2 595 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 ARTNQ5T4W7 220 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 ATXN7L2Q5T6C5 722 aaPredicted RBP14.62□□□□□ -0.07
SMC1A-204ENST00000463684 RWDD4Q6NW29 188 aaKnown RBP14.62□□□□□ -0.07
SMC1A-204ENST00000463684 OGFOD3Q6PK18 319 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 LEKR1Q6ZMV7 388 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 SPRED1Q7Z699 444 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 TAF8Q7Z7C8 310 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 FAM131BQ86XD5 332 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 TMEM35BQ8NCS4 154 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 JPH3Q8WXH2 748 aaPredicted RBP14.62□□□□□ -0.07
SMC1A-204ENST00000463684 C18orf8Q96DM3 657 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 TIGD1Q96MW7 591 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 GDAP1L1Q96MZ0 367 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 RBM15Q96T37 977 aaKnown RBP eCLIP14.62□□□□□ -0.078e-8■□□□□ 9.3
SMC1A-204ENST00000463684 MAGEH1Q9H213 219 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 DNAI1Q9UI46 699 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 MAN1B1Q9UKM7 699 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 CTNND2Q9UQB3 1225 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 COQ6Q9Y2Z9 468 aa14.62□□□□□ -0.07
SMC1A-204ENST00000463684 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.61□□□□□ -0.07
SMC1A-204ENST00000463684 MAPKAPK2P49137 400 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 SUOXP51687 545 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 STX17P56962 302 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 SKIDA1Q1XH10 827 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 WSCD2Q2TBF2 565 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 MAP9Q49MG5 647 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 TMEM52BQ4KMG9 183 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 SMYD5Q6GMV2 418 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 GBP6Q6ZN66 633 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 PIM3Q86V86 326 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 SLC47A2Q86VL8 602 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 ZNF354CQ86Y25 554 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 IRF2BP1Q8IU81 584 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 SLITRK4Q8IW52 837 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 WDR92Q96MX6 357 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 SLC12A9Q9BXP2 914 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 TTYH3Q9C0H2 523 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 EPN3Q9H201 632 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 DKK3Q9UBP4 350 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 OR12D3Q9UGF7 316 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 TUBD1Q9UJT1 453 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 OR1A2Q9Y585 309 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 DGKBQ9Y6T7 804 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 PTPN13Q12923 2485 aa14.61□□□□□ -0.07
SMC1A-204ENST00000463684 ZSCAN5CA6NGD5 496 aaPredicted RBP14.6□□□□□ -0.07
SMC1A-204ENST00000463684 ZW10O43264 779 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 BUB1O43683 1085 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 KDELR3O43731 214 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 NUDT21O43809 227 aaKnown RBP14.6□□□□□ -0.07
SMC1A-204ENST00000463684 RAMP2O60895 175 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 IGSF6O95976 241 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 RHOQP17081 205 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 CR2P20023 1033 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 CLCN1P35523 988 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 CCR10P46092 362 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 GABRB2P47870 512 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 POLE2P56282 527 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 BPIFB4P59827 614 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 FOXK1P85037 733 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 APBA1Q02410 837 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 PAK1Q13153 545 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 SERINC3Q13530 473 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 IGFBP7Q16270 282 aa14.6□□□□□ -0.07
SMC1A-204ENST00000463684 EXOC3L4Q17RC7 722 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms