RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CASC4Q6P4E1 433 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 FAM72BQ86X60 149 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 CCDC117Q8IWD4 279 aaPredicted RBP10.02□□□□□ -0.8
PTPRD-207ENST00000463477 ENDOVQ8N8Q3 282 aaKnown RBP10.02□□□□□ -0.8
PTPRD-207ENST00000463477 PPP1R2P1Q96PQ5 205 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 NELL2Q99435 816 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 BTBD10Q9BSF8 475 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 OSBPL6Q9BZF3 934 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 SLC13A1Q9BZW2 595 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 KCNH6Q9H252 994 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 WDCPQ9H6R7 721 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 ANLNQ9NQW6 1124 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 TMPRSS4Q9NRS4 437 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 HEBP1Q9NRV9 189 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 GKN1Q9NS71 199 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 BFARQ9NZS9 450 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 ZFATQ9P243 1243 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 MCM8Q9UJA3 840 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 STK38LQ9Y2H1 464 aa10.02□□□□□ -0.8
PTPRD-207ENST00000463477 ARIH1Q9Y4X5 557 aaPredicted RBP10.02□□□□□ -0.8
PTPRD-207ENST00000463477 NYNRINQ9P2P1 1898 aaKnown RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ZNF318Q5VUA4 2279 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 MYLKQ15746 1914 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ANAPC1Q9H1A4 1944 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 KANSL1LA0AUZ9 987 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SHISA7A6NL88 538 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 MAN2B1O00754 1011 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 FCHO1O14526 889 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 PLIN3O60664 434 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 CBX6O95503 412 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 GRK2P25098 689 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SPRP35270 261 aaPredicted RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 PSEN1P49768 467 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 CSE1LP55060 971 aaKnown RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SESN2P58004 480 aaPredicted RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ZXDBP98169 803 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ZBTB16Q05516 673 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 STX3Q13277 289 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 PDE1CQ14123 709 aaPredicted RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ZNF77Q15935 545 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 CCDC153Q494R4 210 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 MBLAC2Q68D91 279 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 CWF19L1Q69YN2 538 aaKnown RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ZNF852Q6ZMS4 543 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 LINC00523Q86TU6 105 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 LCA5Q86VQ0 697 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 LONP2Q86WA8 852 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 CCDC33Q8N5R6 958 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 LZTR1Q8N653 840 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 NPWQ8N729 165 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 FAM13CQ8NE31 585 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 FLCNQ8NFG4 579 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SH3RF2Q8TEC5 729 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 TEKT5Q96M29 485 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 HAPLN3Q96S86 360 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 RBBP8Q99708 897 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 TRIM56Q9BRZ2 755 aaKnown RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 IL22Q9GZX6 179 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 TBC1D17Q9HA65 648 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 RNPEPL1Q9HAU8 725 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ARL8BQ9NVJ2 186 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 ARHGEF38Q9NXL2 777 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 NSMCE4AQ9NXX6 385 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 CLIC5Q9NZA1 410 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SEPT10Q9P0V9 454 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 GMIPQ9P107 970 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 TXNDC16Q9P2K2 825 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 OR12D3Q9UGF7 316 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 EMCNQ9ULC0 261 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 VANGL2Q9ULK5 521 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 C15orf41Q9Y2V0 281 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
PTPRD-207ENST00000463477 RPS6KL1Q9Y6S9 549 aa10.02□□□□□ -0.81
PTPRD-207ENST00000463477 SYNJ2BP-COX16A0A087WUM0 186 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 ZCWPW2A0A1B0GU75 182 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 A8MUI8 341 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 CAPN14A8MX76 684 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 STK25O00506 426 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 TPP1O14773 563 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 HGSO14964 777 aaPredicted RBP10.01□□□□□ -0.81
PTPRD-207ENST00000463477 FGF10O15520 208 aaPredicted RBP10.01□□□□□ -0.81
PTPRD-207ENST00000463477 COCHO43405 550 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 PI15O43692 258 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 PEX11AO75192 247 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 LRIG2O94898 1065 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 PROCP04070 461 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 MPOP05164 745 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 FGF3P11487 239 aaPredicted RBP10.01□□□□□ -0.81
PTPRD-207ENST00000463477 COL9A1P20849 921 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 CCNCP24863 283 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 CD68P34810 354 aaPredicted RBP10.01□□□□□ -0.81
PTPRD-207ENST00000463477 PGFP49763 221 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 SERPINB8P50452 374 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 LIMK2P53671 638 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 NRG1Q02297 640 aaPredicted RBP10.01□□□□□ -0.81
PTPRD-207ENST00000463477 BSPRYQ5W0U4 402 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 CES4AQ5XG92 561 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 NAPEPLDQ6IQ20 393 aa10.01□□□□□ -0.81
PTPRD-207ENST00000463477 TLDC1Q6P9B6 456 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms