RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CLDN2P57739 230 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 YPEL5P62699 121 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 E2F1Q01094 437 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 IL10RBQ08334 325 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
RTCB-202ENST00000463455 DPYSQ14117 519 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 PTK2BQ14289 1009 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 AGERQ15109 404 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 CYTH1Q15438 398 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 SKOR2Q2VWA4 1001 aaPredicted RBP12.03□□□□□ -0.48
RTCB-202ENST00000463455 SLC25A45Q8N413 288 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 FAM181AQ8N9Y4 354 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 CXorf40AQ8TE69 158 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 KCTD15Q96SI1 283 aaPredicted RBP12.03□□□□□ -0.48
RTCB-202ENST00000463455 MYOCQ99972 504 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 SUV39H2Q9H5I1 410 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 GPATCH2LQ9NWQ4 482 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 RCOR3Q9P2K3 495 aaPredicted RBP12.03□□□□□ -0.48
RTCB-202ENST00000463455 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 LCMT1Q9UIC8 334 aa12.03□□□□□ -0.48
RTCB-202ENST00000463455 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
RTCB-202ENST00000463455 A0A1W2PQ67 120 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 POM121BA6NF01 834 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 H3BRJ5 948 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 SCAMP1O15126 338 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 GP1BAP07359 652 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 CKMT1AP12532 417 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 SKILP12757 684 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 TIMP2P16035 220 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 XPAP23025 273 aaPredicted RBP12.02□□□□□ -0.49
RTCB-202ENST00000463455 SERPINA4P29622 427 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.49
RTCB-202ENST00000463455 PAPOLAP51003 745 aaKnown RBP12.02□□□□□ -0.49
RTCB-202ENST00000463455 FZD2Q14332 565 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 CA9Q16790 459 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 UGP2Q16851 508 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 PPP6R3Q5H9R7 873 aaPredicted RBP12.02□□□□□ -0.49
RTCB-202ENST00000463455 ERAP2Q6P179 960 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 DHRS13Q6UX07 377 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 LEKR1Q6ZMV7 388 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 LRRC49Q8IUZ0 686 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 ARHGAP12Q8IWW6 846 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 TRIM7Q9C029 511 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 SLC39A8Q9C0K1 460 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 ATP13A3Q9H7F0 1226 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 SP110Q9HB58 689 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 DNAJC28Q9NX36 388 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 CWC15Q9P013 229 aaKnown RBP12.02□□□□□ -0.49
RTCB-202ENST00000463455 IP6K2Q9UHH9 426 aa12.02□□□□□ -0.49
RTCB-202ENST00000463455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.494e-6■■■■□ 22
RTCB-202ENST00000463455 TMEM110-MUSTN1A8MSY1 372 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 J3KR12 359 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 TRIM38O00635 465 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 TPP1O14773 563 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 RAD51BO15315 384 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 SIGLEC6O43699 453 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 SDC3O75056 442 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 PALMO75781 387 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 GYPCP04921 128 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 CYP1A2P05177 515 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 SERPINB6P35237 376 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 PEX5P50542 639 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 DUSP3P51452 185 aaPredicted RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 AP1S1P61966 158 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 POLR2LP62875 67 aaKnown RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 DNAJC3Q13217 504 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 TRIM14Q14142 442 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 CFAP58Q5T655 872 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 ALKBH5Q6P6C2 394 aaKnown RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 MACC1Q6ZN28 852 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 POLNQ7Z5Q5 900 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 SDR16C5Q8N3Y7 309 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 CELF6Q96J87 481 aaKnown RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 PSKH2Q96QS6 385 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.01□□□□□ -0.49
RTCB-202ENST00000463455 CINPQ9BW66 212 aaPredicted RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 MYO1AQ9UBC5 1043 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 IPO11Q9UI26 975 aaKnown RBP12.01□□□□□ -0.49
RTCB-202ENST00000463455 GGT7Q9UJ14 662 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 ITM2BQ9Y287 266 aa12.01□□□□□ -0.49
RTCB-202ENST00000463455 ZZEF1O43149 2961 aa12□□□□□ -0.49
RTCB-202ENST00000463455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12□□□□□ -0.49
RTCB-202ENST00000463455 TK2O00142 265 aa12□□□□□ -0.49
RTCB-202ENST00000463455 MYO1FO00160 1098 aa12□□□□□ -0.49
RTCB-202ENST00000463455 CBFA2T2O43439 604 aa12□□□□□ -0.49
RTCB-202ENST00000463455 SOCS5O75159 536 aa12□□□□□ -0.49
RTCB-202ENST00000463455 GIMD1P0DJR0 217 aa12□□□□□ -0.49
RTCB-202ENST00000463455 JUPP14923 745 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms