RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 FGD3Q5JSP0 725 aa12.9□□□□□ -0.35
NUP58-206ENST00000463407 ZDHHC20Q5W0Z9 365 aa12.9□□□□□ -0.35
NUP58-206ENST00000463407 FOXR2Q6PJQ5 311 aa12.9□□□□□ -0.35
NUP58-206ENST00000463407 PCDH18Q9HCL0 1135 aa12.9□□□□□ -0.35
NUP58-206ENST00000463407 ATP6V1HQ9UI12 483 aa12.9□□□□□ -0.35
NUP58-206ENST00000463407 INSL6Q9Y581 213 aa12.9□□□□□ -0.35
NUP58-206ENST00000463407 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 TRBV23OR9-2A0A075B6M9 112 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 C22orf31O95567 290 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 WNT3AP56704 352 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 CORO7P57737 925 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 LILRA4P59901 499 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 TEAD4Q15561 434 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 TMEM26Q6ZUK4 368 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 C2orf15Q8WU43 125 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 GFM2Q969S9 779 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 PPP1R14AQ96A00 147 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 FCHO1O14526 889 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 CCNDBP1O95273 360 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 FCGR1AP12314 374 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 EPORP19235 508 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 CRATP43155 626 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 RPL14P50914 215 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 NEK2P51955 445 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 RABGGTBP53611 331 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 FAM98BQ52LJ0 330 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PROX1Q92786 737 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 CPXM1Q96SM3 734 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 POLMQ9NP87 494 aaPredicted RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 TBC1D30Q9Y2I9 924 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 ATP6V1B1P15313 513 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PTPN20Q4JDL3 420 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 HEXDCQ8WVB3 486 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PAWRQ96IZ0 340 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 WRAP53Q9BUR4 548 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 KLHL3Q9UH77 587 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PLIN4Q96Q06 1357 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 WARSP23381 471 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 CDH4P55283 916 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 TCHHL1Q5QJ38 904 aaPredicted RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 MICU2Q8IYU8 434 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 GPR156Q8NFN8 814 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 KLHL4Q9C0H6 718 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 CCDC167Q9P0B6 97 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PIGNO95427 931 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 SHBGP04278 402 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 ACADSP16219 412 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 COPZ1P61923 177 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 DPP10Q8N608 796 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 TSEN2Q8NCE0 465 aaKnown RBP12.89□□□□□ -0.35
NUP58-206ENST00000463407 ART4Q93070 314 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PLD4Q96BZ4 506 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 FEM1CQ96JP0 617 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 ZSCAN32Q9NX65 697 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 SLIT2O94813 1529 aa12.89□□□□□ -0.35
NUP58-206ENST00000463407 hCG_2014768A0A024R1R8 64 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 MRASO14807 208 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 FSBPO95073 299 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 PSMC3P17980 439 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 ADRA1BP35368 520 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 DGKGP49619 791 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 SIX5Q8N196 739 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 KLHL23Q8NBE8 558 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
NUP58-206ENST00000463407 HERVK_113Q902F9 699 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 LINGO1Q96FE5 620 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 TRIT1Q9H3H1 467 aaKnown RBP12.88□□□□□ -0.35
NUP58-206ENST00000463407 ZC4H2Q9NQZ6 224 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 LRRC72A6NJI9 287 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 TFEBP19484 476 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 CTBP1Q13363 440 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 BBS12Q6ZW61 710 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 BEND7Q8N7W2 519 aaPredicted RBP12.88□□□□□ -0.35
NUP58-206ENST00000463407 ZFP28Q8NHY6 868 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 LIMD1Q9UGP4 676 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 ERVW-1Q9UQF0 538 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 RAI2Q9Y5P3 530 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 GLYATL1P3A0A0U1RQE8 302 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 NRP1O14786 923 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 KCNH1O95259 989 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 RAB10P61026 200 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 ARHGAP1Q07960 439 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
NUP58-206ENST00000463407 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 NSMCE2Q96MF7 247 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 CD84Q9UIB8 345 aa12.88□□□□□ -0.35
NUP58-206ENST00000463407 INVSQ9Y283 1065 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms