RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 PPP2CAP67775 309 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 ITKQ08881 620 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 NIPAL4Q0D2K0 466 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 IHHQ14623 411 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 SF3A2Q15428 464 aaKnown RBP13.74□□□□□ -0.21
SSBP1-203ENST00000463093 TEX44Q53QW1 395 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 TRIM61Q5EBN2 209 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 TRIM58Q8NG06 486 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 SNX19Q92543 992 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 POLR1EQ9GZS1 481 aaKnown RBP13.74□□□□□ -0.21
SSBP1-203ENST00000463093 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 SLCO1B1Q9Y6L6 691 aa13.74□□□□□ -0.21
SSBP1-203ENST00000463093 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
SSBP1-203ENST00000463093 A0A1W2PQ67 120 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 NEMP1O14524 444 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 SPINT1O43278 529 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 SOCS5O75159 536 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 NEBLO76041 1014 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ITIH2P19823 946 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-203ENST00000463093 RPS21P63220 83 aaKnown RBP13.73□□□□□ -0.21
SSBP1-203ENST00000463093 RACK1P63244 317 aaKnown RBP13.73□□□□□ -0.21
SSBP1-203ENST00000463093 DSC2Q02487 901 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ZBTB17Q13105 803 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 TMEM52BQ4KMG9 183 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 CFAP58Q5T655 872 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 PRR23CQ6ZRP0 262 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ZC3H18Q86VM9 953 aaKnown RBP13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ZSCAN30Q86W11 494 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-203ENST00000463093 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 C1QTNF2Q9BXJ5 285 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 TLR10Q9BXR5 811 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 PCDH12Q9NPG4 1184 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ZFR2Q9UPR6 939 aaKnown RBP13.73□□□□□ -0.21
SSBP1-203ENST00000463093 DMTF1Q9Y222 760 aa13.73□□□□□ -0.21
SSBP1-203ENST00000463093 ATXN2Q99700 1313 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 IGLON5A6NGN9 336 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 H7C0C1 242 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 SLC31A1O15431 190 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 PGLSO95336 258 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 CFIP05156 583 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 PTPN3P26045 913 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 MAT2AP31153 395 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 ATP5OP48047 213 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 CSNK1EP49674 416 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 OTUD4Q01804 1114 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 WASHC5Q12768 1159 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 TRAF2Q12933 501 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 KLF1Q13351 362 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 NOMO1Q15155 1222 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 SETMARQ53H47 684 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 SEL1L3Q68CR1 1132 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 KIAA1161Q6NSJ0 714 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 HTR3CQ8WXA8 447 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 ASB12Q8WXK4 309 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 KLK6Q92876 244 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 SERAC1Q96JX3 654 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 TEKT5Q96M29 485 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 QKIQ96PU8 341 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 SLC17A9Q9BYT1 436 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 SEPT10Q9P0V9 454 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 RAI2Q9Y5P3 530 aa13.72□□□□□ -0.21
SSBP1-203ENST00000463093 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.72□□□□□ -0.21
SSBP1-203ENST00000463093 ASCC3Q8N3C0 2202 aaKnown RBP13.71□□□□□ -0.21
SSBP1-203ENST00000463093 TCRBV7S2A1N4TA0A589 114 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 CFAP69A5D8W1 941 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 GOLGA6L9A6NEM1 432 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 PRAMEF26H0Y7S4 382 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 WNT9AO14904 365 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 MMP20O60882 483 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-203ENST00000463093 PRLP01236 227 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 MMP2P08253 660 aa13.71□□□□□ -0.21
SSBP1-203ENST00000463093 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.21
SSBP1-203ENST00000463093 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.21
SSBP1-203ENST00000463093 LMNB2Q03252 620 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms