RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 KDELC2Q7Z4H8 507 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 KIAA0907Q7Z7F0 614 aaPredicted RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
RPA3-205ENST00000462723 MPP5Q8N3R9 675 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 PPHLN1Q8NEY8 458 aaKnown RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 ZBTB9Q96C00 473 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 ASIC4Q96FT7 647 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 ZFYVE19Q96K21 471 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 EXOC2Q96KP1 924 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 CYTH2Q99418 400 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 SH3GL2Q99962 352 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 KXD1Q9BQD3 176 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 WDR83Q9BRX9 315 aaKnown RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 STMN4Q9H169 189 aaPredicted RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 CENPHQ9H3R5 247 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 EBF3Q9H4W6 596 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 ACSS3Q9H6R3 686 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 ECT2Q9H8V3 914 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 ARNT2Q9HBZ2 717 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 NOD2Q9HC29 1040 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 PIH1D1Q9NWS0 290 aaKnown RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 SYBUQ9NX95 663 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 LHX3Q9UBR4 397 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 FBXO10Q9UK96 956 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 INTS6Q9UL03 887 aaKnown RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 HS3ST2Q9Y278 367 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 SLC27A6Q9Y2P4 619 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 USP15Q9Y4E8 981 aaPredicted RBP8.27□□□□□ -1.09
RPA3-205ENST00000462723 CDH23Q9H251 3354 aa8.27□□□□□ -1.09
RPA3-205ENST00000462723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 FAM237BA0A1B0GVD1 139 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 LOC285095A0A1B0GVY8 99 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 TCRBV9S1A1TA0A576 114 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 TLDC2A0PJX2 215 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SMIM23A6NLE4 172 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 K7ERQ8 282 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SOX1O00570 391 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 RGS16O15492 202 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 SMAD6O43541 496 aaKnown RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 ATP9BO43861 1147 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 TULP3O75386 442 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 NDST3O95803 873 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 IGSF6O95976 241 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 ASLP04424 464 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 FGF1P05230 155 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 ATP5BP06576 529 aaKnown RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 ALADP13716 330 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 TPH1P17752 444 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 NNMTP40261 264 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 CSNK1DP48730 415 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SNRPD1P62314 119 aaKnown RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 CRADDP78560 199 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 CDK18Q07002 472 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 LAMB3Q13751 1172 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 RUNX3Q13761 415 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 GRM2Q14416 872 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SLC1A5Q15758 541 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 PCID2Q5JVF3 399 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SIRPB2Q5JXA9 342 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SPANXN3Q5MJ09 141 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 CERCAMQ5T4B2 595 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 ATXN7L2Q5T6C5 722 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 STEAP4Q687X5 459 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 GRAMD4Q6IC98 578 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 DENND5AQ6IQ26 1287 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 PARM1Q6UWI2 310 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 UNC5AQ6ZN44 842 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SRLQ86TD4 932 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 ADIPOR2Q86V24 386 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 KRT222Q8N1A0 295 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 RYBPQ8N488 228 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 SH2D3CQ8N5H7 860 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SLC25A41Q8N5S1 370 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 PCDH20Q8N6Y1 951 aaKnown RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 ST13P5Q8NFI4 369 aaPredicted RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 GSDMBQ8TAX9 411 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 FBF1Q8TES7 1133 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SUSD6Q92537 303 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 TTC17Q96AE7 1141 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 ISG20Q96AZ6 181 aaKnown RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 TRMT61BQ9BVS5 477 aaKnown RBP8.26□□□□□ -1.09
RPA3-205ENST00000462723 ADGRE3Q9BY15 652 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 CIPCQ9C0C6 399 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 CEP44Q9C0F1 390 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 TMBIM4Q9HC24 238 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 FAM53CQ9NYF3 392 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 OGFRQ9NZT2 677 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 DEC1Q9P2X7 70 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 EPS15L1Q9UBC2 864 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 FETUBQ9UGM5 382 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SLC24A2Q9UI40 661 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SOX13Q9UN79 622 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 SLC8A2Q9UPR5 921 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 RAI2Q9Y5P3 530 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 ANKRD36A6QL64 1941 aa8.26□□□□□ -1.09
RPA3-205ENST00000462723 HEATR9A2RTY3 570 aa8.25□□□□□ -1.09
RPA3-205ENST00000462723 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms